RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 LlphQ9D945 130 aaKnown RBP9.78□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Rad50P70388 1312 aa9.77□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 RubcnlQ3TD16 648 aa9.77□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Larp1Q6ZQ58 1072 aaKnown RBP9.77□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Prune1Q8BIW1 454 aa9.77□□□□□ -0.84
Ccdc60-201ENSMUST00000050178 Ltbp1Q8CG19 1712 aa9.77□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 ZyxQ62523 564 aa9.77□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Zbtb40Q6PCS8 1258 aa9.77□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Ubxn10Q8BG34 277 aa9.77□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Myh1Q5SX40 1942 aa9.76□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Fgd1P52734 960 aa9.76□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Fam102bQ8BQS4 339 aa9.76□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Pmfbp1Q9WVQ0 1022 aa9.76□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Fkbp4P30416 458 aa9.76□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Ccdc155Q80VJ8 648 aa9.76□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 TefQ9JLC6 301 aa9.76□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Ttll7A4Q9F0 912 aa9.75□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Zdhhc9P59268 364 aa9.75□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Zbtb3Q91X45 518 aa9.75□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 PigbQ9JJQ0 542 aa9.75□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 1700006A11RikB9EHI3 544 aa9.75□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Ankle2Q6P1H6 964 aa9.75□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Chmp7Q8R1T1 451 aa9.75□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 MetP16056 1379 aa9.75□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Exoc6bA6H5Z3 810 aa9.74□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Rsph3aQ3UFY4 516 aa9.74□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Col3a1P08121 1464 aa9.74□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Efcab2Q9CQ46 164 aa9.74□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Tceal9Q9DD24 104 aa9.74□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Dock5B2RY04 1868 aa9.74□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Utp18Q5SSI6 552 aaKnown RBP9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Prkab2Q6PAM0 271 aa9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Bmp2kQ91Z96 1138 aa9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Nphp3Q7TNH6 1325 aa9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Nlrp1aQ2LKU9 1182 aa9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Ddx58Q6Q899 926 aa9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Znf526Q8BI66 675 aa9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Lmbr1lQ9D1E5 489 aa9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 4933402E13RikQ9D4D2 429 aa9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Isy1Q69ZQ2 285 aaKnown RBP9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Mphosph10Q810V0 681 aaKnown RBP9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Cc2d1aQ8K1A6 943 aa9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 AnlnQ8K298 1121 aaKnown RBP9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Sf3a1Q8K4Z5 791 aaKnown RBP9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Txnrd1Q9JMH6 613 aa9.73□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Arfgef1G3X9K3 1846 aaKnown RBP9.72□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Hspa1lP16627 641 aa9.72□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Fkbp1aP26883 108 aaKnown RBP9.72□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Zranb3Q6NZP1 1069 aa9.72□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Dmrt2Q8BG36 561 aa9.72□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Tmem87bQ8BKU8 555 aa9.72□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Syde2E9PUP1 1314 aa9.72□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Slc5a1Q8C3K6 665 aa9.72□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Flad1Q8R123 492 aa9.72□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Nup98Q6PFD9 1816 aaKnown RBP9.72□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Rangap1P46061 589 aaKnown RBP9.72□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Ppil4Q9CXG3 492 aaKnown RBP9.72□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Q9D2X8 372 aa9.72□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Atg9aQ68FE2 551 aa9.71□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Sp8Q8BMJ8 486 aa9.71□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Ybx3Q9JKB3 361 aaKnown RBP9.71□□□□□ -0.85
Ccdc60-201ENSMUST00000050178 Myh3P13541 1940 aa9.71□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Gripap1Q8VD04 806 aa9.71□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Ciao1Q99KN2 339 aa9.71□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Cfdp1O88271 295 aaKnown RBP9.7□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Mcm4P49717 862 aa9.7□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Tbc1d30Q69ZT9 766 aa9.7□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Ltb4r2Q9JJL9 360 aa9.7□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Ppfia1B2RXQ2 1266 aa9.7□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Ppp4r3aQ6P2K6 820 aa9.7□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Zkscan1Q8BGS3 561 aaKnown RBP9.7□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Casq1O09165 405 aa9.7□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Hmox1P14901 289 aa9.7□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Strn4P58404 760 aa9.7□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Ddx19aQ61655 478 aaKnown RBP9.7□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Zpr1Q62384 459 aa9.7□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Elmsan1E9Q2I4 1089 aaKnown RBP9.69□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Vps33bP59016 617 aa9.69□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Znf692Q3U381 531 aa9.69□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Cypt2Q6P924 180 aa9.69□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Ssh1Q76I79 1042 aa9.69□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Dmrtc1Q9D9R7 182 aa9.69□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Fam50bQ9WTJ8 334 aa9.69□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Pa2g4P50580 394 aaKnown RBP9.69□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Bloc1s4Q8VED2 215 aa9.69□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Duox1A2AQ92 1551 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Plcb3P51432 1234 aaKnown RBP9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Gnat3Q3V3I2 354 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Rbm27Q5SFM8 1060 aaKnown RBP9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Pdzrn3Q69ZS0 1063 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Tmc2Q8R4P4 888 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Lrrc59Q922Q8 307 aaKnown RBP9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Znf609Q8BZ47 1413 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Gm45015A0A140LII9 184 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Gm18336A0A140LIU8 765 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Prl3d2F6R3P9 224 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 CalcaP70160 136 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 NfkbibQ60778 359 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Sgsm2Q80U12 1005 aa9.68□□□□□ -0.86
Ccdc60-201ENSMUST00000050178 Gigyf1Q99MR1 1044 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms