RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Ccz1Q8C1Y8 480 aa17.59■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Brf1Q8CFK2 676 aa17.59■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Disp3A3KFU9 1347 aa17.59■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Gemin5Q8BX17 1502 aaKnown RBP17.58■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Ppfia1B2RXQ2 1266 aa17.58■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Foxp4Q9DBY0 795 aaKnown RBP17.58■□□□□ 0.41
Ushbp1-201ENSMUST00000049184 Kansl3A2RSY1 903 aaKnown RBP17.58■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Ms4a1P19437 291 aa17.58■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Ifit2Q64112 472 aa17.58■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Ddx41Q91VN6 622 aaKnown RBP17.58■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Bmp2kQ91Z96 1138 aa17.58■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Zeb2Q9R0G7 1215 aa17.58■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Leo1Q5XJE5 667 aa17.57■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Zfp113Q8C689 439 aa17.57■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Cdca7lQ922M5 438 aa17.57■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Yeats2Q3TUF7 1407 aa17.57■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Fmnl2A2APV2 1086 aa17.57■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Ercc6lQ8BHK9 1240 aa17.57■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Atp8b3Q6UQ17 1335 aa17.57■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Ubn2Q80WC1 1314 aa17.57■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Mctp1E9PV86 951 aa17.56■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 MpndQ3TV65 487 aa17.56■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Sh3bp1P55194 680 aa17.56■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Slc4a10Q5DTL9 1118 aa17.56■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Tlcd1Q99JT6 247 aa17.56■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 CenpqQ9CPQ5 267 aa17.56■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 4930548H24RikQ9D496 437 aa17.56■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Sgsm2Q80U12 1005 aa17.55■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Gtpbp4Q99ME9 634 aaKnown RBP17.55■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Tceal9Q9DD24 104 aa17.55■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Astn2Q80Z10 1352 aa17.55■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Eef2kO08796 724 aa17.55■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Pkp1P97350 728 aaKnown RBP17.55■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Lins1Q3U1D0 764 aa17.55■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 EspnlQ3UYR4 1005 aa17.55■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Mybbp1aQ7TPV4 1344 aaKnown RBP17.54■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Kcnb2A6H8H5 907 aa17.54■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Cep135Q6P5D4 1140 aa17.54■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Frmd3Q8BHD4 595 aa17.54■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Tsr2Q8C8T8 191 aa17.54■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Otud6bQ8K2H2 294 aa17.54■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Mrpl50Q8VDT9 159 aaKnown RBP17.54■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Zkscan5Q9Z1D8 819 aa17.54■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Chd4Q6PDQ2 1915 aaKnown RBP17.54■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Med1Q925J9 1575 aa17.54■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Aox1O54754 1333 aa17.53■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Atf5O70191 283 aa17.53■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Ppp6r1Q7TSI3 856 aa17.52■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Bloc1s2Q9CWG9 143 aa17.52■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Sh3bgrQ9WUZ7 214 aa17.52■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Ess2O70279 479 aa17.52■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Chpf2Q3UU43 768 aa17.52■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 TfrcQ62351 763 aaKnown RBP17.52■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Zpr1Q62384 459 aa17.52■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Tmem132aQ922P8 1018 aa17.52■□□□□ 0.4
Ushbp1-201ENSMUST00000049184 Pnpla7A2AJ88 1352 aa17.52■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Tnnt1O88346 262 aa17.51■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Ap5z1Q3U829 807 aa17.51■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Plcd1Q8R3B1 756 aa17.51■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Syt10Q9R0N4 523 aa17.51■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Krt85Q9Z2T6 507 aa17.51■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Ercc6l2Q9JIM3 1537 aa17.51■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Kcnj4P52189 445 aa17.51■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Tlr7P58681 1050 aa17.51■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Ddx11Q6AXC6 880 aa17.51■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Fez2Q6TYB5 348 aa17.51■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Itsn1Q9Z0R4 1714 aa17.51■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Slit2Q9R1B9 1521 aa17.5■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Cyp2d11P24457 504 aa17.5■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 SnrkQ8VDU5 748 aa17.5■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Rbm8a2A0A0N4SUH6 174 aa17.5■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Cers3Q1A3B0 383 aa17.5■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Cep57l1Q8VDS7 400 aa17.5■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Bicd2Q921C5 820 aa17.5■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Rbm8aQ9CWZ3 174 aa17.5■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Mtx1P47802 317 aa17.49■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 FanccP50652 591 aa17.49■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Eya1P97767 591 aa17.49■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Pde3bQ61409 1100 aa17.49■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Lrrc8aQ80WG5 810 aa17.49■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Dnaaf2Q8BPI1 814 aa17.49■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Cyp2d12Q8BVD2 504 aa17.49■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Creld2Q9CYA0 350 aa17.49■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Vps33aQ9D2N9 598 aa17.49■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Ak2Q9WTP6 239 aa17.49■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Dmrt2Q8BG36 561 aa17.49■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Tsen34Q8BMZ5 316 aa17.49■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Taf5lQ91WQ5 589 aa17.49■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Larp1bA0A0A6YXJ7 370 aaKnown RBP17.48■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Ube2oQ6ZPJ3 1288 aa17.48■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Myo5bP21271 1818 aa17.48■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Fam228bQ497Q6 232 aa17.48■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Ulbp1Q8HWA3 334 aa17.48■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Osbpl5Q9ER64 874 aa17.48■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Psma5Q9Z2U1 241 aaKnown RBP17.48■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Aox4Q3TYQ9 1336 aa17.47■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Cfap58B2RW38 873 aa17.47■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 1700113H08RikE9Q9Q5 327 aa17.47■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Arid5bQ8BM75 1188 aaKnown RBP17.47■□□□□ 0.39
Ushbp1-201ENSMUST00000049184 Me3Q8BMF3 604 aa17.47■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms