RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Gnl2Q99LH1 728 aaKnown RBP15□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Ccdc94Q9D6J3 314 aa15□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Tpx2A2APB8 745 aaKnown RBP15□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Kcnj4P52189 445 aa15□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Dnajc2P54103 621 aaKnown RBP14.99□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Cct4P80315 539 aaKnown RBP14.99□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Tmem132eQ6IEE6 982 aa14.99□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Gm21969J3QJZ1 289 aa14.99□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Zfp251Q6PCX8 632 aa14.99□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Adgrl1Q80TR1 1466 aa14.99□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Ccdc155Q80VJ8 648 aa14.99□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Smc4Q8CG47 1286 aa14.99□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Znhit6Q3UFB2 460 aaKnown RBP14.99□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Prpf4bQ61136 1007 aaKnown RBP14.99□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Spty2d1Q68FG3 682 aa14.99□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Zranb3Q6NZP1 1069 aa14.99□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Syt1P46096 421 aa14.98□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Tpm1P58771 284 aa14.98□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Pdlim2Q8R1G6 349 aa14.98□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Atp8b2P98199 1209 aa14.98□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Ripk4Q9ERK0 786 aa14.98□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Tbc1d8Q9Z1A9 1134 aa14.98□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Arhgef28P97433 1693 aa14.98□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Ptgs1P22437 602 aa14.98□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Anp32cQ64G17 123 aa14.98□□□□□ -0.01
Clcn3-201ENSMUST00000004430 SrrtQ99MR6 875 aaKnown RBP14.98□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Cnpy2Q9QXT0 182 aa14.98□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Abl1P00520 1123 aa14.97□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Tyro3P55144 880 aa14.97□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Krt82Q99M74 516 aa14.97□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Rbm8a2A0A0N4SUH6 174 aa14.97□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Bach2P97303 839 aa14.97□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Lamb3Q61087 1168 aa14.97□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Plcd3Q8K2J0 785 aa14.97□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Rbm8aQ9CWZ3 174 aa14.97□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Esyt1Q3U7R1 1092 aaKnown RBP14.97□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Cep135Q6P5D4 1140 aa14.97□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Larp6Q8BN59 492 aa14.97□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Igbp1bQ9QZ29 343 aa14.97□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Ppfia1B2RXQ2 1266 aa14.96□□□□□ -0.01
Clcn3-201ENSMUST00000004430 HdgfP51859 237 aaKnown RBP14.96□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Uhrf1bp1lA2RSJ4 1457 aa14.96□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Mcmdc2E9Q956 681 aa14.96□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Bag1Q60739 355 aa14.96□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Rrs1Q9CYH6 365 aaKnown RBP14.96□□□□□ -0.01
Clcn3-201ENSMUST00000004430 Syt10Q9R0N4 523 aa14.96□□□□□ -0.01
Clcn3-201ENSMUST00000004430 CrcpO35427 148 aa14.95□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Tti2Q8BGV4 512 aa14.95□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Ccdc47Q9D024 483 aaKnown RBP14.95□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Bag3Q9JLV1 577 aaKnown RBP14.95□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Abca14E9Q8F8 1683 aa14.95□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Q3UJC8 639 aa14.95□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Kif13aQ9EQW7 1749 aa14.95□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Erbb4Q61527 1308 aa14.94□□□□□ -0.02
Clcn3-201ENSMUST00000004430 GpkowQ56A08 488 aa14.94□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Map3k2Q61083 619 aa14.94□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Znf771Q8BJ90 317 aa14.94□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Vps18Q8R307 973 aa14.94□□□□□ -0.02
Clcn3-201ENSMUST00000004430 ScaperF8VQ70 1398 aaKnown RBP14.94□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Uri1Q3TLD5 531 aa14.94□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Spag5Q7TME2 1165 aa14.94□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Mrvi1Q9WUX5 899 aaKnown RBP14.94□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Serpinb6bO08804 377 aa14.94□□□□□ -0.02
Clcn3-201ENSMUST00000004430 EspnlQ3UYR4 1005 aa14.94□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Hand2Q61039 217 aa14.94□□□□□ -0.02
Clcn3-201ENSMUST00000004430 SelenooQ9DBC0 667 aa14.93□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Cavin2Q63918 418 aaKnown RBP14.93□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Rbm28Q8CGC6 750 aaKnown RBP14.93□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Bloc1s2Q9CWG9 143 aa14.93□□□□□ -0.02
Clcn3-201ENSMUST00000004430 ItpripQ3TNL8 555 aa14.93□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Ddx46Q569Z5 1032 aaKnown RBP14.93□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Edc3Q8K2D3 508 aaKnown RBP14.93□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Utp18Q5SSI6 552 aaKnown RBP14.92□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Uhrf1bp1B2KF50 1429 aa14.92□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Tbc1d7Q9D0K0 293 aa14.92□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Ddx27Q921N6 760 aaKnown RBP14.92□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Aldh1l2Q8K009 923 aa14.92□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Mmp8O70138 465 aa14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Mdm2P23804 489 aa14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Fbln2P37889 1221 aa14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Frat1P70339 274 aa14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Ccdc34Q3UI66 367 aa14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 GphnQ8BUV3 769 aaKnown RBP14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Ttc19Q8CC21 365 aa14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Atf7Q8R0S1 413 aa14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Luzp1Q8R4U7 1068 aaKnown RBP14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Ccar2Q8VDP4 922 aaKnown RBP14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Rbm42Q91V81 474 aaKnown RBP14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Mrps25Q9D125 171 aaKnown RBP14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Lekr1B2RVN1 116 aa14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Secisbp2lQ6A098 1086 aaKnown RBP14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Ifit2Q64112 472 aa14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Amotl2Q8K371 772 aa14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Dhx30Q99PU8 1217 aaKnown RBP14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Fam50bQ9WTJ8 334 aa14.91□□□□□ -0.02
Clcn3-201ENSMUST00000004430 NktrP30415 1453 aa14.9□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Oas2E9Q9A9 742 aa14.9□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Cfap157Q0VFX2 523 aa14.9□□□□□ -0.02
Clcn3-201ENSMUST00000004430 MpndQ3TV65 487 aa14.9□□□□□ -0.02
Clcn3-201ENSMUST00000004430 Ano1Q8BHY3 960 aa14.9□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 83.6 ms