RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Kcnb2A6H8H5 907 aa22.5■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 DpydQ8CHR6 1025 aa22.5■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Cchcr1Q8K2I2 770 aa22.5■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Wdr17E9Q271 1322 aa22.5■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Unc13bQ9Z1N9 1602 aa22.5■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Irf9Q61179 399 aa22.49■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Mknk2Q8CDB0 459 aa22.49■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Bicc1Q99MQ1 977 aaKnown RBP22.49■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Ddx60E9PZQ1 1711 aa22.48■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Ube2hP62257 183 aa22.48■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Fam184aE9PW83 1143 aa22.47■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Anp32cQ64G17 123 aa22.47■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Casc1Q6TDU8 730 aa22.47■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Sgsm2Q80U12 1005 aa22.47■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Olfml1Q8BSH2 233 aa22.47■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Q9D9S1 216 aa22.47■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 DmtnQ9WV69 405 aa22.47■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Topaz1E5FYH1 1653 aa22.47■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Ccdc173A0JLY1 547 aa22.47■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Mindy4Q3UQI9 744 aa22.47■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Gzf1Q4VBD9 706 aa22.47■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 SympkQ80X82 1284 aa22.47■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Ccdc178Q8CDV0 866 aa22.47■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Grm8P47743 908 aa22.46■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Ddx11Q6AXC6 880 aa22.46■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 SnrkQ8VDU5 748 aa22.46■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Cdca7lQ922M5 438 aa22.46■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Simc1E9Q6E9 1354 aa22.46■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 TnrQ8BYI9 1358 aa22.46■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Naa30Q8CES0 364 aa22.46■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Med4Q9CQA5 270 aa22.46■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Ripk4Q9ERK0 786 aa22.46■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Taf7Q9R1C0 341 aa22.46■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Mybbp1aQ7TPV4 1344 aaKnown RBP22.46■■□□□ 1.19
Shkbp1-201ENSMUST00000003857 Gse1Q3U3C9 1213 aa22.45■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Dmrt2Q8BG36 561 aa22.45■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Zscan22Q8BGS5 496 aa22.45■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Rbm8a2A0A0N4SUH6 174 aa22.45■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 F2rP30558 430 aa22.45■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Zbtb45Q52KG4 520 aa22.45■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Ubxn10Q8BG34 277 aa22.45■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Edc3Q8K2D3 508 aaKnown RBP22.45■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 SrrtQ99MR6 875 aaKnown RBP22.45■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Rbm8aQ9CWZ3 174 aa22.45■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Samm50Q8BGH2 469 aa22.44■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Sf3a1Q8K4Z5 791 aaKnown RBP22.44■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Ak2Q9WTP6 239 aa22.44■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Pdia4P08003 638 aaKnown RBP22.43■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Tex2Q6ZPJ0 1128 aaKnown RBP22.43■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Zfp51Q3U4L8 781 aa22.43■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Tjp1P39447 1745 aaKnown RBP22.43■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Pkp1P97350 728 aaKnown RBP22.42■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Col15a1O35206 1367 aa22.42■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 EappQ5BU09 281 aa22.42■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Ccdc155Q80VJ8 648 aa22.42■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Pdia6Q922R8 440 aaKnown RBP22.41■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Ets1P27577 440 aa22.41■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Mrpl50Q8VDT9 159 aaKnown RBP22.41■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Sytl4Q9R0Q1 673 aa22.41■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Ppm1mQ8BU27 406 aa22.4■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Lmbr1lQ9D1E5 489 aa22.4■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Pdzd9Q9D9M4 266 aa22.4■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Il1rapl2Q9ERS6 686 aa22.4■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Slc26a8Q8R0C3 999 aa22.4■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Shank2Q80Z38 1476 aa22.4■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Gm10471E9Q1C7 252 aa22.39■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Eef2kO08796 724 aa22.39■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Cd22P35329 862 aa22.39■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Bag3Q9JLV1 577 aaKnown RBP22.39■■□□□ 1.18
Shkbp1-201ENSMUST00000003857 Igfbp6P47880 238 aa22.39■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Pcmtd1P59913 357 aa22.39■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Bach2P97303 839 aa22.39■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Usp48Q3V0C5 1052 aa22.39■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Wdr24Q8CFJ9 790 aa22.39■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Sp8Q8BMJ8 486 aa22.38■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Tbc1d31Q6NXY1 996 aa22.38■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Rbm10Q99KG3 930 aaKnown RBP22.38■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 NaspQ99MD9 773 aaKnown RBP22.38■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Igbp1bQ9QZ29 343 aa22.38■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Ugt1a5B2RT14 529 aa22.37■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Nup88Q8CEC0 753 aaKnown RBP22.37■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Nlrp9bQ66X22 1003 aa22.36■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Atf7Q8R0S1 413 aa22.36■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Mad1l1Q9WTX8 717 aaKnown RBP22.36■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Tnks1bp1P58871 1720 aa22.36■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Aox1O54754 1333 aa22.36■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Adcy5P84309 1262 aa22.35■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Iqsec3Q3TES0 1195 aa22.35■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Dzip1Q8BMD2 852 aa22.35■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Psma5Q9Z2U1 241 aaKnown RBP22.35■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Col22a1E9Q7P1 1613 aa22.35■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Spata31d1bE9QA57 1361 aa22.35■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Mdm2P23804 489 aa22.35■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Babam1Q3UI43 333 aa22.35■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 4930504O13RikQ8C5Z9 145 aa22.35■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Zfp113Q8C689 439 aa22.35■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Rhot2Q8JZN7 620 aa22.35■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Polr3dQ91WD1 398 aa22.35■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Ubr2Q6WKZ8 1755 aa22.35■■□□□ 1.17
Shkbp1-201ENSMUST00000003857 Ccdc66Q6NS45 935 aa22.34■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms