RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 UGT8Q16880 541 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 SYT16Q17RD7 645 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 NDUFAF5Q5TEU4 345 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 FAM91A1Q658Y4 838 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 C18orf63Q68DL7 685 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 RHBDD2Q6NTF9 364 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 GPR180Q86V85 440 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 TREML1Q86YW5 311 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 RIMKLAQ8IXN7 391 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 SLC38A9Q8NBW4 561 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 GLB1L3Q8NCI6 653 aaPredicted RBP8.83□□□□□ -1
PHGDH-228ENST00000641847 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.83□□□□□ -1
PHGDH-228ENST00000641847 PROKR1Q8TCW9 393 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 ADAMTS18Q8TE60 1221 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 NUDT8Q8WV74 236 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 PNPLA2Q96AD5 504 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 PEX11GQ96HA9 241 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 GBP5Q96PP8 586 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 CSF3RQ99062 836 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 REEP4Q9H6H4 257 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 MIEF1Q9NQG6 463 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 CCDC167Q9P0B6 97 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 MAPRE3Q9UPY8 281 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 WBP11Q9Y2W2 641 aaKnown RBP8.83□□□□□ -1
PHGDH-228ENST00000641847 ATG4BQ9Y4P1 393 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 PCDHGA6Q9Y5G7 932 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 FBN3Q75N90 2809 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 NUP210LQ5VU65 1888 aa8.83□□□□□ -1
PHGDH-228ENST00000641847 SCN3AQ9NY46 2000 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 A0A1W2PR48 441 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 C1orf226A1L170 272 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 FAM234BA2RU67 622 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 CAPN14A8MX76 684 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 C21orf140B9A014 251 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 CHST10O43529 356 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 FURINP09958 794 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 SPTBP11277 2137 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 PIM1P11309 404 aaPredicted RBP8.82□□□□□ -1
PHGDH-228ENST00000641847 RNH1P13489 461 aaKnown RBP8.82□□□□□ -1
PHGDH-228ENST00000641847 PRF1P14222 555 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 DRD2P14416 443 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 CD1EP15812 388 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 PCSK2P16519 638 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 F8A1P23610 371 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 ADSLP30566 484 aaPredicted RBP8.82□□□□□ -1
PHGDH-228ENST00000641847 RORAP35398 523 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 RPL3P39023 403 aaKnown RBP8.82□□□□□ -1
PHGDH-228ENST00000641847 ZFP36L2P47974 494 aaKnown RBP8.82□□□□□ -1
PHGDH-228ENST00000641847 POLR2JP52435 117 aaKnown RBP8.82□□□□□ -1
PHGDH-228ENST00000641847 KCNK10P57789 538 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 PDE7AQ13946 482 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 RCAN2Q14206 197 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 DPY19L1Q2PZI1 675 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 TIGD2Q4W5G0 525 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 SPANXN4Q5MJ08 99 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 SP5Q6BEB4 398 aaPredicted RBP8.82□□□□□ -1
PHGDH-228ENST00000641847 OR52E8Q6IFG1 317 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 ANKRD26P1Q6NSI1 321 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 COX15Q7KZN9 410 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 R3HCC1LQ7Z5L2 792 aaKnown RBP8.82□□□□□ -1
PHGDH-228ENST00000641847 SNX32Q86XE0 403 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 SHISA5Q8N114 240 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 GALNT6Q8NCL4 622 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 OR7A2PQ8NGA2 310 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 OR51Q1Q8NH59 317 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 UCN3Q969E3 161 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 PPCDCQ96CD2 204 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 MTERF3Q96E29 417 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 YIPF2Q9BWQ6 316 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 GPR87Q9BY21 358 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 WDR41Q9HAD4 459 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 CLK4Q9HAZ1 481 aaKnown RBP8.82□□□□□ -1
PHGDH-228ENST00000641847 ZNF304Q9HCX3 659 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 TMEM45AQ9NWC5 275 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 MS4A12Q9NXJ0 267 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 KCMF1Q9P0J7 381 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 ATP6V1HQ9UI12 483 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 ITGB1BP2Q9UKP3 347 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 EXO1Q9UQ84 846 aaKnown RBP8.82□□□□□ -1
PHGDH-228ENST00000641847 PCDHA9Q9Y5H5 950 aa8.82□□□□□ -1
PHGDH-228ENST00000641847 NAV3Q8IVL0 2385 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 FER1L5A0AVI2 2057 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 CCDC154A6NI56 674 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 GLOD5A6NK44 160 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 CCT8L1PA6NM43 557 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 PROM1O43490 865 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 UBOX5O94941 541 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 CBX6O95503 412 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 FHP07954 510 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 SNRPB2P08579 225 aaKnown RBP8.81□□□□□ -1
PHGDH-228ENST00000641847 DDX5P17844 614 aaKnown RBP8.81□□□□□ -1
PHGDH-228ENST00000641847 CAPN3P20807 821 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 AGXTP21549 392 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 TLX1P31314 330 aaPredicted RBP8.81□□□□□ -1
PHGDH-228ENST00000641847 S100A3P33764 101 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 KIR3DL1P43629 444 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 XCR1P46094 333 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 HNRNPFP52597 415 aaKnown RBP8.81□□□□□ -1
PHGDH-228ENST00000641847 DGKQP52824 942 aa8.81□□□□□ -1
PHGDH-228ENST00000641847 RPS15P62841 145 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms