RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 VTI1BQ9UEU0 232 aa12.82□□□□□ -0.36
HLA-C-210ENST00000640219 IGHV3-20A0A0C4DH32 117 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 GABRR3A8MPY1 467 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 DNAJB6O75190 326 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 NEURL1O76050 574 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 C2P06681 752 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 CD1DP15813 335 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 CRABP2P29373 138 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 HOXC12P31275 282 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 KCNC1P48547 511 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 NUP107P57740 925 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 ABATP80404 500 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 POU4F1Q01851 419 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 BLMHQ13867 455 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 FAM219BQ5XKK7 198 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 ADNP2Q6IQ32 1131 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 ARSKQ6UWY0 536 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 PAMR1Q6UXH9 720 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 FRA10AC1Q70Z53 315 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 TMPRSS11BQ86T26 416 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 THOC6Q86W42 341 aaKnown RBP12.81□□□□□ -0.36
HLA-C-210ENST00000640219 RPRMLQ8N4K4 120 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 NKAPQ8N5F7 415 aaKnown RBP12.81□□□□□ -0.36
HLA-C-210ENST00000640219 CPSF7Q8N684 471 aaKnown RBP12.81□□□□□ -0.36
HLA-C-210ENST00000640219 AMER3Q8N944 861 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 OR9A4Q8NGU2 314 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 STON2Q8WXE9 905 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 JADE3Q92613 823 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 MMABQ96EY8 250 aaPredicted RBP12.81□□□□□ -0.36
HLA-C-210ENST00000640219 NPAS2Q99743 824 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 C20orf27Q9GZN8 174 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 MRGBPQ9NV56 204 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 TMEM184CQ9NVA4 438 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 SLC22A14Q9Y267 594 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 LRCH1Q9Y2L9 728 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 OARD1Q9Y530 152 aa12.81□□□□□ -0.36
HLA-C-210ENST00000640219 A0A087X1B8 175 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 PABPN1LA6NDY0 278 aaKnown RBP12.8□□□□□ -0.36
HLA-C-210ENST00000640219 C4orf51C9J302 202 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 SLC22A2O15244 555 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 TAPBPO15533 448 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 MAN1A2O60476 641 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 CDC40O60508 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
HLA-C-210ENST00000640219 WDR47O94967 919 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 RAF1P04049 648 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 SERPIND1P05546 499 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 ANXA5P08758 320 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 SLC35E2BP0CK96 405 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 STMN1P16949 149 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 SLC26A3P40879 764 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 RAB10P61026 200 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 ACTR3P61158 418 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 OLR1P78380 273 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 LIPMQ5VYY2 423 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 EPGNQ6UW88 154 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 ZYG11AQ6WRX3 759 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 CPEB2Q7Z5Q1 589 aaKnown RBP12.8□□□□□ -0.36
HLA-C-210ENST00000640219 PDSS2Q86YH6 399 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 MYLK4Q86YV6 388 aaPredicted RBP12.8□□□□□ -0.36
HLA-C-210ENST00000640219 KIRREL3Q8IZU9 778 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 KCTD4Q8WVF5 259 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 SLC5A11Q8WWX8 675 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 RERGQ96A58 199 aaPredicted RBP12.8□□□□□ -0.36
HLA-C-210ENST00000640219 RHBDF1Q96CC6 855 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 MVB12AQ96EY5 273 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 PDLIM5Q96HC4 596 aaKnown RBP12.8□□□□□ -0.36
HLA-C-210ENST00000640219 SERPINI1Q99574 410 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 EBF4Q9BQW3 602 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 ALG9Q9H6U8 611 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 OXSMQ9NWU1 459 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 NDE1Q9NXR1 346 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 HCN3Q9P1Z3 774 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 ACOT9Q9Y305 439 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 RAP2CQ9Y3L5 183 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 NBEAL1Q6ZS30 2694 aa12.8□□□□□ -0.36
HLA-C-210ENST00000640219 SGK494L7N484 410 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 TFECO14948 347 aaPredicted RBP12.79□□□□□ -0.36
HLA-C-210ENST00000640219 OR1F1O43749 312 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 NME2P1O60361 137 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 PRMT3O60678 531 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 PRAMEF4O60810 478 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 RDH16O75452 317 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 SLC25A12O75746 678 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 BAG2O95816 211 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 ENO2P09104 434 aaPredicted RBP12.79□□□□□ -0.36
HLA-C-210ENST00000640219 NME2P22392 152 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 HNF4AP41235 474 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 KIR2DL3P43628 341 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 HSPA7P48741 367 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 RPL14P50914 215 aaKnown RBP12.79□□□□□ -0.36
HLA-C-210ENST00000640219 EMP3P54852 163 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 AP1S2P56377 157 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 SNTB1Q13884 538 aaKnown RBP12.79□□□□□ -0.36
HLA-C-210ENST00000640219 KEAP1Q14145 624 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 TGFBIQ15582 683 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 PRAMEF9Q5VWM5 478 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 C16orf89Q6UX73 402 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 LANCL3Q6ZV70 420 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 CHSY3Q70JA7 882 aa12.79□□□□□ -0.36
HLA-C-210ENST00000640219 ZC3H7AQ8IWR0 971 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms