RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 FIGLAQ6QHK4 219 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 LARP4Q71RC2 724 aaKnown RBP eCLIP7.56□□□□□ -1.2
SCARB2-220ENST00000640076 ALYREFQ86V81 257 aaKnown RBP7.56□□□□□ -1.2
SCARB2-220ENST00000640076 PLD3Q8IV08 490 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.56□□□□□ -1.2
SCARB2-220ENST00000640076 RNF175Q8N4F7 328 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 GBP7Q8N8V2 638 aaPredicted RBP7.56□□□□□ -1.2
SCARB2-220ENST00000640076 ANKRD53Q8N9V6 530 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 NCSTNQ92542 709 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 TUBGCP3Q96CW5 907 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 TGM7Q96PF1 710 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 CCDC28BQ9BUN5 200 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 CHST8Q9H2A9 424 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 BRF2Q9HAW0 419 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 TBC1D23Q9NUY8 699 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 ANKMY1Q9P2S6 941 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 COA3Q9Y2R0 106 aaPredicted RBP7.56□□□□□ -1.2
SCARB2-220ENST00000640076 TMED5Q9Y3A6 229 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 SPTBP11277 2137 aa7.56□□□□□ -1.2
SCARB2-220ENST00000640076 COL5A1P20908 1838 aaPredicted RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 TLCD2A6NGC4 264 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PCNX2A6NKB5 2137 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 E9PBE3 544 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 FOXE1O00358 373 aaPredicted RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 LSM1O15116 133 aaKnown RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 CASC3O15234 703 aaKnown RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 ZW10O43264 779 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 RGS14O43566 566 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 OR1F1O43749 312 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 LCMT2O60294 686 aaKnown RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 CTSVO60911 334 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PRR35P0CG20 571 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 CD59P13987 128 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 EZRP15311 586 aaKnown RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 ST6GAL1P15907 406 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 CDH3P22223 829 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PSMA4P25789 261 aaKnown RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 SERPINB1P30740 379 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 CSF2RBP32927 897 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PRR20EP86478 221 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PRR20CP86479 221 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PRR20DP86480 221 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PRR20BP86481 221 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PRR20AP86496 221 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 RELAQ04206 551 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 TARDBPQ13148 414 aaKnown RBP eCLIP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PUM1Q14671 1186 aaKnown RBP eCLIP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 GPR68Q15743 365 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 ZIC1Q15915 447 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 MAPKAPK3Q16644 382 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 METTL21CQ5VZV1 264 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 TMEM198Q66K66 360 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 ARHGAP11AQ6P4F7 1023 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 FAM92BQ6ZTR7 304 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 TAGAPQ8N103 731 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 CFHR4Q92496 578 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 ZDHHC12Q96GR4 267 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 TRAPPC9Q96Q05 1148 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 CD180Q99467 661 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 MAP3K3Q99759 626 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 SYNPO2LQ9H987 977 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 CRLF2Q9HC73 371 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 TMEM9BQ9NQ34 198 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 C1GALT1Q9NS00 363 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 CAB39Q9Y376 341 aaPredicted RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PTPRZ1P23471 2315 aaPredicted RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 MN1Q10571 1320 aaPredicted RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 ANKDD1BA6NHY2 528 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 SLC9B1P1A6NJY1 282 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PTGES3LE9PB15 166 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 NPIPB8E9PQR5 432 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PRAMEF10O60809 474 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PEX11AO75192 247 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 RSL1D1O76021 490 aaKnown RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 ETHE1O95571 254 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 TBX6O95947 436 aaPredicted RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 C9P02748 559 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 ALBP02768 609 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 FTH1P19P0C7X4 201 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 CKMT2P17540 419 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 LBPP18428 481 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PRPH2P23942 346 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 GSTM2P28161 218 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 ADSLP30566 484 aaPredicted RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 AHRP35869 848 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 DUSP3P51452 185 aaPredicted RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 RPS15AP62244 130 aaKnown RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 RPS13P62277 151 aaKnown RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 CYP4F2P78329 520 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 IRX1P78414 480 aaPredicted RBP7.55□□□□□ -1.2
SCARB2-220ENST00000640076 PHEXP78562 749 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 RAB39AQ14964 217 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 IMPG1Q17R60 797 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 AP5B1Q2VPB7 878 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 ATP6AP1LQ52LC2 224 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 SPDYAQ5MJ70 313 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 C6orf136Q5SQH8 315 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 OGFOD2Q6N063 350 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 FBXO42Q6P3S6 717 aa7.55□□□□□ -1.2
SCARB2-220ENST00000640076 FOXR1Q6PIV2 292 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms