RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 CD84Q9UIB8 345 aa19.47■□□□□ 0.71
PMS1-222ENST00000639501 CDH10Q9Y6N8 788 aa19.47■□□□□ 0.71
PMS1-222ENST00000639501 CIB4A0PJX0 185 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 TMEM202A6NGA9 273 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 ARHGEF33A8MVX0 844 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 UGDHO60701 494 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 LHCGRP22888 699 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 GAS1P54826 345 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 WDR5P61964 334 aaKnown RBP19.46■□□□□ 0.71
PMS1-222ENST00000639501 GPR17Q13304 367 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 MBTPS1Q14703 1052 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 TRIM71Q2Q1W2 868 aaKnown RBP19.46■□□□□ 0.71
PMS1-222ENST00000639501 RTP2Q5QGT7 225 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 TRIM40Q6P9F5 258 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 PCNPQ8WW12 178 aaKnown RBP19.46■□□□□ 0.71
PMS1-222ENST00000639501 ATF6BQ99941 703 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 PPIL3Q9H2H8 161 aaKnown RBP19.46■□□□□ 0.71
PMS1-222ENST00000639501 SRRDQ9UH36 339 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 ATP6V1HQ9UI12 483 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 Q9Y3F1 56 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 OR6C75A6NL08 312 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 INMT-MINDY4F8WBC2 141 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 ORC5O43913 435 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 CSNK1DP48730 415 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 PER3P56645 1201 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 MRPL28Q13084 256 aaKnown RBP19.46■□□□□ 0.71
PMS1-222ENST00000639501 OCLNQ16625 522 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 TCTN3Q6NUS6 607 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 CBARPQ8N350 705 aaPredicted RBP19.46■□□□□ 0.71
PMS1-222ENST00000639501 TMEM163Q8TC26 289 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 AP3S1Q92572 193 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 PLD4Q96BZ4 506 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 LRR1Q96L50 414 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 KLHL42Q9P2K6 505 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 ANGPT4Q9Y264 503 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 PCDHGB7Q9Y5F8 929 aa19.46■□□□□ 0.71
PMS1-222ENST00000639501 CASKO14936 926 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 AKAP8O43823 692 aaKnown RBP19.45■□□□□ 0.7
PMS1-222ENST00000639501 PSIP1O75475 530 aaKnown RBP19.45■□□□□ 0.7
PMS1-222ENST00000639501 SLC22A5O76082 557 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 MPC1LP0DKB6 136 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 OR12D1P0DN82 309 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 AP1S2P56377 157 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 WNT4P56705 351 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 FCN2Q15485 313 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 CCDC85BQ15834 202 aaPredicted RBP19.45■□□□□ 0.7
PMS1-222ENST00000639501 HECTD3Q5T447 861 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 TRILQ7L0X0 811 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.45■□□□□ 0.7
PMS1-222ENST00000639501 LINC01599Q8WXQ3 324 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 HYLS1Q96M11 299 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 ZNF582Q96NG8 517 aaPredicted RBP19.45■□□□□ 0.7
PMS1-222ENST00000639501 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.45■□□□□ 0.7
PMS1-222ENST00000639501 MVB12BQ9H7P6 319 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 BRF2Q9HAW0 419 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 ELF5Q9UKW6 265 aaPredicted RBP19.45■□□□□ 0.7
PMS1-222ENST00000639501 IGLV3-16A0A075B6K0 115 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 QSOX1O00391 747 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 ADAM12O43184 909 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 IFNA14P01570 189 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 PDGFAP04085 211 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 FURINP09958 794 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 ZNF763Q0D2J5 394 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 LRRC74AQ0VAA2 488 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 SP140Q13342 867 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 SPIN4Q56A73 249 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 DEF8Q6ZN54 512 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 GRAMD2AQ8IUY3 354 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 LMNTD1Q8N9Z9 388 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 WDR48Q8TAF3 677 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 VOPP1Q96AW1 172 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 BRD9Q9H8M2 597 aa19.45■□□□□ 0.7
PMS1-222ENST00000639501 FRMPD3Q5JV73 1810 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 DOCK6Q96HP0 2047 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 KLHL18O94889 574 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 LALBAP00709 142 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 PRKAR2AP13861 404 aaKnown RBP19.44■□□□□ 0.7
PMS1-222ENST00000639501 EVX1P49640 407 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 PTPN5P54829 565 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 DCST1Q5T197 706 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 ACSM5Q6NUN0 579 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 COMMD6Q7Z4G1 85 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 SLC51BQ86UW2 128 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 OR8H3Q8N146 312 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 DNAJC5GQ8N7S2 189 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 GPR137Q96N19 417 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 MGAT4BQ9UQ53 548 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 LINC00862A6NCI5 91 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 OR5K3A6NET4 321 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 BTN3A3O00478 584 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 STK25O00506 426 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 GPR37L1O60883 481 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 DUSP11O75319 330 aaKnown RBP19.44■□□□□ 0.7
PMS1-222ENST00000639501 HOXD10P28358 340 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 PTSQ03393 145 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 SF3A2Q15428 464 aaKnown RBP19.44■□□□□ 0.7
PMS1-222ENST00000639501 KLHL22Q53GT1 634 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 ZNF57Q68EA5 555 aaPredicted RBP19.44■□□□□ 0.7
PMS1-222ENST00000639501 TEX261Q6UWH6 196 aa19.44■□□□□ 0.7
PMS1-222ENST00000639501 B3GLCTQ6Y288 498 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms