RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 LIPKQ5VXJ0 399 aa19.08■□□□□ 0.64
SYNGAP1-227ENST00000638142 LILRA6Q6PI73 481 aa19.08■□□□□ 0.64
SYNGAP1-227ENST00000638142 CLDN22Q8N7P3 220 aa19.08■□□□□ 0.64
SYNGAP1-227ENST00000638142 SLC7A13Q8TCU3 470 aa19.08■□□□□ 0.64
SYNGAP1-227ENST00000638142 LINC00615Q96LM1 132 aaPredicted RBP19.08■□□□□ 0.64
SYNGAP1-227ENST00000638142 ZNF717Q9BY31 904 aaPredicted RBP19.08■□□□□ 0.64
SYNGAP1-227ENST00000638142 MTCL1Q9Y4B5 1905 aaKnown RBP19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 C17orf113A0A1B0GUU1 675 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 HMX3A6NHT5 357 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 WWP2O00308 870 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 HMGN4O00479 90 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 ACADLP28330 430 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 DMPKQ09013 629 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 COX10Q12887 443 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 NDUFA9Q16795 377 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 SPDYE7PQ495Y7 208 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 KHDRBS2Q5VWX1 349 aaKnown RBP19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 CD300LDQ6UXZ3 194 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 RAB8BQ92930 207 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 TM4SF18Q96CE8 201 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 ZNF514Q96K75 400 aaPredicted RBP19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 PHOX2BQ99453 314 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 LINC00597Q9H2U6 94 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 SEC14L3Q9UDX4 400 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 A0A1W2PQ09 198 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 ANHXE9PGG2 379 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 RAB36O95755 333 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 TP53P04637 393 aaPredicted RBP19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 AZGP1P25311 298 aaKnown RBP19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 ASAH1Q13510 395 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 GLYR1Q49A26 553 aaPredicted RBP19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 RBM45Q8IUH3 476 aaKnown RBP19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 OR4D11Q8NGI4 311 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 SMPDL3AQ92484 453 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 HHIPL1Q96JK4 782 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 MSLNLQ96KJ4 702 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 ZBP1Q9H171 429 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 RHBGQ9H310 441 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 SIRT3Q9NTG7 399 aaPredicted RBP19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 TXNL4BQ9NX01 149 aaKnown RBP19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 SAGE1Q9NXZ1 904 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 TVP23BQ9NYZ1 205 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 TBC1D14Q9P2M4 693 aa19.07■□□□□ 0.64
SYNGAP1-227ENST00000638142 A0A1W2PRQ8 180 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 NME6O75414 186 aaPredicted RBP19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 CDRT1O95170 752 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 CPEP16870 476 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 FRKP42685 505 aaPredicted RBP19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 PCBP4P57723 403 aaKnown RBP19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 XKRXQ6PP77 449 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 USP30Q70CQ3 517 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 BCDIN3DQ7Z5W3 292 aaKnown RBP19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 CACTIN-AS1Q8N1I8 211 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 DEPDC7Q96QD5 511 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 ZDHHC5Q9C0B5 715 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 SLC22A4Q9H015 551 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 TDP1Q9NUW8 608 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 NINQ8N4C6 2090 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 TBX6O95947 436 aaPredicted RBP19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 TNNI3P19429 210 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 PPM1AP35813 382 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 HSPB3Q12988 150 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 KIAA1211LQ6NV74 962 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 PAQR6Q6TCH4 344 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 GALNT12Q8IXK2 581 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 LINC00471Q8N535 108 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 KREMEN2Q8NCW0 462 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 OR52I1Q8NGK6 324 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 RAD51AP1Q96B01 352 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 IL17FQ96PD4 163 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 NELL2Q99435 816 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 TMEM245Q9H330 911 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 TIGARQ9NQ88 270 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 A4GNTQ9UNA3 340 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 KLHL20Q9Y2M5 609 aa19.06■□□□□ 0.64
SYNGAP1-227ENST00000638142 MEIOCA2RUB1 952 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 CCL16O15467 120 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 TLX2O43763 284 aaPredicted RBP19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 PRKYO43930 277 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 B4GALT2O60909 372 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 DDX6P26196 483 aaKnown RBP eCLIP19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 BSGP35613 385 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 BNC1Q01954 994 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 FAM131AQ6UXB0 335 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 CELF5Q8N6W0 485 aaKnown RBP19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 CREB3L4Q8TEY5 395 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 ZBED6CLQ96FA7 236 aaPredicted RBP19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 ZNF764Q96H86 408 aaPredicted RBP19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 QRFPRQ96P65 431 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 MS4A8Q9BY19 250 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 MCOLN1Q9GZU1 580 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 HCFC1R1Q9NWW0 138 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 TESQ9UGI8 421 aaKnown RBP19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 SLC28A2O43868 658 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 POP7O75817 140 aaKnown RBP19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 KELP23276 732 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 VASPP50552 380 aaPredicted RBP19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 CAMK2BQ13554 666 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 TBRG1Q3YBR2 411 aa19.05■□□□□ 0.64
SYNGAP1-227ENST00000638142 SYT14P1Q58G82 188 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms