RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 IRAK2O43187 625 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 SEMA4FO95754 770 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 IL3P08700 152 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 CHRNB4P30926 498 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 HSD11B2P80365 405 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 MEP1AQ16819 746 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 KRBOX4Q5JUW0 171 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 OSTM1Q86WC4 334 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 MSL3Q8N5Y2 521 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 OR9I1Q8NGQ6 314 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 STON2Q8WXE9 905 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 MTG2Q9H4K7 406 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 CREBZFQ9NS37 354 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 PCDH10Q9P2E7 1040 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 RAB26Q9ULW5 256 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 KDELR3O43731 214 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 ARSAP15289 507 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 PRPS1L1P21108 318 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 SCAPQ12770 1279 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 LHFPL3Q86UP9 236 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 DDIT4LQ96D03 193 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 CTRCQ99895 268 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 NSUN3Q9H649 340 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 MINDY3Q9H8M7 445 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 TM9SF3Q9HD45 589 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 TAS2R10Q9NYW0 307 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 PRLP01236 227 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 RGS6P49758 472 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 FAM217AQ8IXS0 508 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 ZNF514Q96K75 400 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 ASB3Q9Y575 518 aa17.09■□□□□ 0.33
CACNA1A-227ENST00000636549 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 GRHL2Q6ISB3 625 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 TMEFF1Q8IYR6 380 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 ZNF431Q8TF32 576 aaPredicted RBP17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 HOXB13Q92826 284 aaPredicted RBP17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 TOMM40LQ969M1 308 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 TTYH3Q9C0H2 523 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 OAZ3Q9UMX2 235 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 MAGED1Q9Y5V3 778 aaPredicted RBP17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 SERPINA7P05543 415 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 LIPCP11150 499 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 ANXA3P12429 323 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 DYRK1AQ13627 763 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 RPS26P11Q5JNZ5 115 aaPredicted RBP17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 METTL2BQ6P1Q9 378 aaKnown RBP17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 SUN5Q8TC36 379 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 TMEM234Q8WY98 164 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 TAMM41Q96BW9 452 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 FAM46AQ96IP4 442 aaKnown RBP17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 SUSD3Q96L08 255 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 KLHL42Q9P2K6 505 aa17.08■□□□□ 0.33
CACNA1A-227ENST00000636549 FSCN2O14926 492 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 VEGFDO43915 354 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 MICU1Q9BPX6 476 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 GPRC5BQ9NZH0 403 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 SLIT1O75093 1534 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 LOC100130705A0A1B0GUX0 176 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 MTMR11A4FU01 709 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 CD9P21926 228 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 DCKP27707 260 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 SOX9P48436 509 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 LIPKQ5VXJ0 399 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 NCEH1Q6PIU2 408 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 TCEAL8Q8IYN2 117 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 OR56A1Q8NGH5 318 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 SFXN2Q96NB2 322 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 HMGN1P05114 100 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 PRKCIP41743 596 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 SLC15A1P46059 708 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 XCR1P46094 333 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 ROR2Q01974 943 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 HNRNPDQ14103 355 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 LINC00696Q6ZRV3 163 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 FRZBQ92765 325 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 AURKBQ96GD4 344 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 HCFC1R1Q9NWW0 138 aa17.08■□□□□ 0.32
CACNA1A-227ENST00000636549 CX3CR1P49238 355 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 PHC1P78364 1004 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 LIPIQ6XZB0 460 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 LANCL3Q6ZV70 420 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 MUC13Q9H3R2 512 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 ETAA1Q9NY74 926 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 COPZ2Q9P299 210 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 THBS2P35442 1172 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 RHDQ02161 417 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 NKPD1Q17RQ9 610 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 LACTB2Q53H82 288 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 TMEM151AQ8N4L1 468 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 OR56B2PQ8NGI1 322 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 NDNFQ8TB73 568 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 DPH7Q9BTV6 452 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 RGCCQ9H4X1 137 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 LRRN3E7EW58 273 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 FBXO45P0C2W1 286 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 OR7A5Q15622 319 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 SLC14A2Q15849 920 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 DPH2Q9BQC3 489 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 PLSCR5A0PG75 271 aa17.07■□□□□ 0.32
CACNA1A-227ENST00000636549 UNC119BA6NIH7 251 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms