RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 STARD4Q96DR4 205 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 FBXL20Q96IG2 436 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 TRIM54Q9BYV2 358 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 REXO4Q9GZR2 422 aaKnown RBP16.48■□□□□ 0.23
CLN6-212ENST00000636020 FBXO5Q9UKT4 447 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 KCNE2Q9Y6J6 123 aa16.48■□□□□ 0.23
CLN6-212ENST00000636020 PABPN1LA6NDY0 278 aaKnown RBP16.47■□□□□ 0.23
CLN6-212ENST00000636020 C16orf97H3BN30 126 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 TP53I11O14683 189 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 GUCA1CO95843 209 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 CHMP24386 653 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 THBS2P35442 1172 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 IDUAP35475 653 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 FBXW4P57775 412 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 IGLV3-21P80748 117 aaPredicted RBP16.47■□□□□ 0.23
CLN6-212ENST00000636020 SRYQ05066 204 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 CASC4Q6P4E1 433 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 TRIM40Q6P9F5 258 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 SCIMPQ6UWF3 145 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 TMIGD1Q6UXZ0 262 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 TMEM64Q6YI46 380 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 CAND1Q86VP6 1230 aaKnown RBP16.47■□□□□ 0.23
CLN6-212ENST00000636020 C7orf57Q8NEG2 295 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 ZNF669Q96BR6 464 aaPredicted RBP16.47■□□□□ 0.23
CLN6-212ENST00000636020 GAL3ST4Q96RP7 486 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 NDNQ99608 321 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 WWTR1Q9GZV5 400 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 LYRM4Q9HD34 91 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 PRDM7Q9NQW5 492 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 ELOVL5Q9NYP7 299 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 TAS2R13Q9NYV9 303 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 SLC22A14Q9Y267 594 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 MEGF8Q7Z7M0 2845 aa16.47■□□□□ 0.23
CLN6-212ENST00000636020 SVEP1Q4LDE5 3571 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 ZCWPW2A0A1B0GU75 182 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.46■□□□□ 0.23
CLN6-212ENST00000636020 KLF4O43474 513 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 CLEC3AO75596 197 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 PLAUP00749 431 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 TPSB2P20231 275 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 GSTM2P28161 218 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 PTPN6P29350 595 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 TBX2Q13207 712 aaPredicted RBP16.46■□□□□ 0.23
CLN6-212ENST00000636020 RPS6KA2Q15349 733 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 TPSAB1Q15661 275 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 TIGD3Q6B0B8 471 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 VWA1Q6PCB0 445 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 C4orf22Q6V702 233 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 SLC29A4Q7RTT9 530 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 LMNTD2Q8IXW0 634 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 PPWD1Q96BP3 646 aaKnown RBP16.46■□□□□ 0.23
CLN6-212ENST00000636020 CTHRC1Q96CG8 243 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 TMEM41AQ96HV5 264 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 ART5Q96L15 291 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 DGAT2Q96PD7 388 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 MAPKAP1Q9BPZ7 522 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 LACRTQ9GZZ8 138 aa16.46■□□□□ 0.23
CLN6-212ENST00000636020 COPS7BQ9H9Q2 264 aaPredicted RBP16.46■□□□□ 0.23
CLN6-212ENST00000636020 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.46■□□□□ 0.23
CLN6-212ENST00000636020 TEX10Q9NXF1 929 aaPredicted RBP16.46■□□□□ 0.23
CLN6-212ENST00000636020 CAPN14A8MX76 684 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 OVOL3O00110 214 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 GNB5O14775 395 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 HS3ST1O14792 307 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 DYRK3O43781 588 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 FGF17O60258 216 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 H2AFYO75367 372 aaKnown RBP16.45■□□□□ 0.22
CLN6-212ENST00000636020 TGM6O95932 706 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 CRHP06850 196 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 C1GALT1C1LP0DN25 315 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 POU2F1P14859 743 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 CASP3P42574 277 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 SRSF2Q01130 221 aaKnown RBP16.45■□□□□ 0.22
CLN6-212ENST00000636020 EBPQ15125 230 aaKnown RBP16.45■□□□□ 0.22
CLN6-212ENST00000636020 BEX5Q5H9J7 111 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 C6orf52Q5T4I8 152 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 ENPP6Q6UWR7 440 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 SLCO4C1Q6ZQN7 724 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 VN1R5Q7Z5H4 357 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 MILR1Q7Z6M3 343 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 OR4N5Q8IXE1 308 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 TAGAPQ8N103 731 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 DOK4Q8TEW6 326 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 CAVIN3Q969G5 261 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 PGM2Q96G03 612 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 SLC39A3Q9BRY0 314 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 OPN3Q9H1Y3 402 aaPredicted RBP16.45■□□□□ 0.22
CLN6-212ENST00000636020 WWOXQ9NZC7 414 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 MAPRE3Q9UPY8 281 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 LAMP3Q9UQV4 416 aa16.45■□□□□ 0.22
CLN6-212ENST00000636020 IQANK1A0A1B0GTG1 560 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 FRG2CA6NGY1 282 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 FTCDO95954 541 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 ENO2P09104 434 aaPredicted RBP16.44■□□□□ 0.22
CLN6-212ENST00000636020 HPDP32754 393 aaPredicted RBP16.44■□□□□ 0.22
CLN6-212ENST00000636020 GCKP35557 465 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 ACVR1BP36896 505 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 CDKN2DP55273 166 aa16.44■□□□□ 0.22
CLN6-212ENST00000636020 RPS4XP62701 263 aaKnown RBP16.44■□□□□ 0.22
CLN6-212ENST00000636020 OCRLQ01968 901 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms