RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	ZNF12	P17014	697 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ATP5A1	P25705	553 aa	Known RBP	13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PIK3CB	P42338	1070 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PAGE3	Q5JUK9	113 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	KLHL24	Q6TFL4	600 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	RAB43	Q86YS6	212 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ZNF740	Q8NDX6	193 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	OR52E1	Q8NGJ3	308 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	RNASE11	Q8TAA1	199 aa	Known RBP	13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	FAM174A	Q8TBP5	190 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	NKD1	Q969G9	470 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	EFHD2	Q96C19	240 aa	Predicted RBP	13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	EPHX3	Q9H6B9	360 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SNN	O75324	88 aa	Predicted RBP	13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	RET	P07949	1114 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	OMP	P47874	163 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	MEP1A	Q16819	746 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	IQCC	Q4KMZ1	466 aa		13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SPIN1	Q9Y657	262 aa	Predicted RBP	13.64	□□□□□ -0.23
NEDD4L-238	ENST00000635997	FER1L6	Q2WGJ9	1857 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SLC35F4	A4IF30	521 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PRRT4	C9JH25	899 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CLDN8	P56748	225 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	KCTD11	Q693B1	232 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CARM1	Q86X55	608 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	GALNT12	Q8IXK2	581 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	NLGN4X	Q8N0W4	816 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	FRMD1	Q8N878	549 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	TCEANC	Q8N8B7	351 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ZNF527	Q8NB42	609 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	TMIE	Q8NEW7	156 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.63	□□□□□ -0.23	2e-11	■■■■■ 40.8
NEDD4L-238	ENST00000635997	INPP5K	Q9BT40	448 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	DEFB126	Q9BYW3	111 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	DNAJC27	Q9NZQ0	273 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	HAT1	O14929	419 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	TSPAN9	O75954	239 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	H6PD	O95479	791 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	RPLP0	P05388	317 aa	Known RBP	13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	POR	P16435	677 aa	Predicted RBP	13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	HOXB6	P17509	224 aa	Known RBP	13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CERS1	P27544	350 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ADRA1A	P35348	466 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ABAT	P80404	500 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	GAB3	Q8WWW8	586 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	KCNS3	Q9BQ31	491 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	TRIM2	Q9C040	744 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	C1orf21	Q9H246	121 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SEMA4G	Q9NTN9	838 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	INTS6	Q9UL03	887 aa	Known RBP	13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	HTR3E	A5X5Y0	456 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	C11orf98	E9PRG8	122 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	FLRT2	O43155	660 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PLOD3	O60568	738 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CSTA	P01040	98 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	MNX1	P50219	401 aa	Predicted RBP	13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ST3GAL3	Q11203	375 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	WSCD2	Q2TBF2	565 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CTSL3P	Q5NE16	218 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	FOXB2	Q5VYV0	432 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ERMP1	Q7Z2K6	904 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	GPAT4	Q86UL3	456 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ATCAY	Q86WG3	371 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SLC7A5P1	Q8MH63	180 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CENPS	Q8N2Z9	138 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	RFK	Q969G6	155 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CITED4	Q96RK1	184 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SORT1	Q99523	831 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CHRD	Q9H2X0	955 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	OR51I1	Q9H343	314 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	MS4A12	Q9NXJ0	267 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	GPRC5B	Q9NZH0	403 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	KCMF1	Q9P0J7	381 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SLC9B1P1	A6NJY1	282 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CDK4	P11802	303 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	KRR1	Q13601	381 aa	Known RBP	13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	SF3A2	Q15428	464 aa	Known RBP	13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	NPTX1	Q15818	432 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	DCAF12	Q5T6F0	453 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	DHRS13	Q6UX07	377 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	P2RY8	Q86VZ1	359 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	OR5P2	Q8WZ92	322 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	MRGPRX1	Q96LB2	322 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	ATOH8	Q96SQ7	321 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	NEK6	Q9HC98	313 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	IL20RA	Q9UHF4	553 aa		13.63	□□□□□ -0.23
NEDD4L-238	ENST00000635997	POU6F2	P78424	691 aa	Predicted RBP	13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	OTUD1	Q5VV17	481 aa	Predicted RBP	13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	OR4C11	Q6IEV9	310 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	NATD1	Q8N6N6	113 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	NAXE	Q8NCW5	288 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	GPR150	Q8NGU9	434 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	C11orf24	Q96F05	449 aa	Predicted RBP	13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	CRNN	Q9UBG3	495 aa	Predicted RBP	13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	VILL	O15195	856 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	FPR1	P21462	350 aa		13.62	□□□□□ -0.23
NEDD4L-238	ENST00000635997	MRPL58	Q14197	206 aa	Known RBP	13.62	□□□□□ -0.23

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