RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 UBQLN3Q9H347 655 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 PRM3Q9NNZ6 103 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 DNAJC11Q9NVH1 559 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 GALNT8Q9NY28 637 aa18.42■□□□□ 0.54
TARDBP-228ENST00000629725 EIF3LQ9Y262 564 aaKnown RBP18.42■□□□□ 0.54
TARDBP-228ENST00000629725 INAFM1C9JVW0 142 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 TP53I11O14683 189 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 PRAMEF4O60810 478 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 TMIGD3P0DMS9 266 aaPredicted RBP18.41■□□□□ 0.54
TARDBP-228ENST00000629725 BMP7P18075 431 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 CPA2P48052 419 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 HERVK_113P63132 956 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 ERVK-8P63133 956 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 DOC2AQ14183 400 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 RCAN2Q14206 197 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 TOMM20Q15388 145 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 TGFBIQ15582 683 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 CYP1B1Q16678 543 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 AP5B1Q2VPB7 878 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 PRAMEF9Q5VWM5 478 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 PRSS57Q6UWY2 283 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 RNF111Q6ZNA4 994 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 LUZP2Q86TE4 346 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 TAGAPQ8N103 731 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 C9orf106Q8NAJ2 232 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 ANKRD49Q8WVL7 239 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 WDYHV1Q96HA8 205 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 RILPQ96NA2 401 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 GNRHR2Q96P88 292 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 KRT12Q99456 494 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 EFCAB11Q9BUY7 163 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 ERVK-6Q9BXR3 956 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 UGT2B28Q9BY64 529 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 RPF2Q9H7B2 306 aaKnown RBP18.41■□□□□ 0.54
TARDBP-228ENST00000629725 CNOT10Q9H9A5 744 aaKnown RBP18.41■□□□□ 0.54
TARDBP-228ENST00000629725 ERVK-19Q9WJR5 959 aa18.41■□□□□ 0.54
TARDBP-228ENST00000629725 SCELO95171 688 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 SNX4O95219 450 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 CD22P20273 847 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 MASP1P48740 699 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 LAPTM5Q13571 262 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 EBPQ15125 230 aaKnown RBP18.4■□□□□ 0.54
TARDBP-228ENST00000629725 RPS6KA2Q15349 733 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 HIST2H2ACQ16777 129 aaPredicted RBP18.4■□□□□ 0.54
TARDBP-228ENST00000629725 DCST1Q5T197 706 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 BICRALQ6AI39 1079 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 HIST2H2AA3Q6FI13 130 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 TRMT10BQ6PF06 316 aaKnown RBP18.4■□□□□ 0.54
TARDBP-228ENST00000629725 PACS2Q86VP3 889 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 TCAIMQ8N3R3 496 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 SNX31Q8N9S9 440 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 DOK4Q8TEW6 326 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 GRK7Q8WTQ7 553 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 NANOS1Q8WY41 292 aaKnown RBP18.4■□□□□ 0.54
TARDBP-228ENST00000629725 ABTB1Q969K4 478 aaPredicted RBP18.4■□□□□ 0.54
TARDBP-228ENST00000629725 WDR34Q96EX3 536 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 MS4A14Q96JA4 679 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 TMEM79Q9BSE2 394 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 MS4A8Q9BY19 250 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 PHACTR1Q9C0D0 580 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 PLAC1Q9HBJ0 212 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 MS4A12Q9NXJ0 267 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 WWOXQ9NZC7 414 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 C15orf41Q9Y2V0 281 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 STAB1Q9NY15 2570 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 MXRA5Q9NR99 2828 aa18.4■□□□□ 0.54
TARDBP-228ENST00000629725 CUBNO60494 3623 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 CAPN14A8MX76 684 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 GOLGA6L6A8MZA4 724 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 TAPBPO15533 448 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 ALOX15P16050 662 aaPredicted RBP18.39■□□□□ 0.53
TARDBP-228ENST00000629725 GGT5P36269 586 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 SSR2P43308 183 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 SLC37A1P57057 533 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 FOXF2Q12947 444 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 SLAMF1Q13291 335 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 ZNF267Q14586 743 aaPredicted RBP18.39■□□□□ 0.53
TARDBP-228ENST00000629725 TMEM35AQ53FP2 167 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 EIPR1Q53HC9 387 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 FBXO48Q5FWF7 155 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 PAGE2BQ5JRK9 111 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 YTHDF3Q7Z739 585 aaKnown RBP18.39■□□□□ 0.53
TARDBP-228ENST00000629725 ST13P4Q8IZP2 240 aaPredicted RBP18.39■□□□□ 0.53
TARDBP-228ENST00000629725 ZPLD1Q8TCW7 415 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 TANKQ92844 425 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 CFAP36Q96G28 342 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 VPS39Q96JC1 886 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 SFXN3Q9BWM7 321 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 NDRG3Q9UGV2 375 aa18.39■□□□□ 0.53
TARDBP-228ENST00000629725 FAM95CA0A1B0GW59 222 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 OR6C76A6NM76 312 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 SH3BGRLO75368 114 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 TGFB1P01137 390 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 CYP4B1P13584 511 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 HSPA7P48741 367 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 FBXW4P57775 412 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 TAS2R39P59534 338 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 PDK4Q16654 411 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 SPRED3Q2MJR0 410 aa18.38■□□□□ 0.53
TARDBP-228ENST00000629725 WIPI1Q5MNZ9 446 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms