RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CPT1CQ8TCG5 803 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 TLCD1Q96CP7 247 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 KLHL29Q96CT2 875 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 APIPQ96GX9 242 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 ZNF764Q96H86 408 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 SENP5Q96HI0 755 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 MFRPQ9BY79 579 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 CDCP1Q9H5V8 836 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 TRIM45Q9H8W5 580 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 ZBTB20Q9HC78 741 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 MYOTQ9UBF9 498 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 MAPRE3Q9UPY8 281 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 DLGAP4Q9Y2H0 992 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 RAP2CQ9Y3L5 183 aa13.04□□□□□ -0.32
SNRPA1-216ENST00000626000 GLOD5A6NK44 160 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 HMGB1P1B2RPK0 211 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 BCAS2O75934 225 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 DDAH2O95865 285 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 CRYABP02511 175 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 IGKV3-11P04433 115 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 CHN1P15882 459 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 DDCP20711 480 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 SERPINB3P29508 390 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 CD97P48960 835 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 SSR4P51571 173 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 ABCE1P61221 599 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 RNF4P78317 190 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 ID2Q02363 134 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 BTKQ06187 659 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 STX3Q13277 289 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 TUBA3CQ13748 450 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 INPP5JQ15735 1006 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 MPEG1Q2M385 716 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 SMU1Q2TAY7 513 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 ATP6AP1LQ52LC2 224 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 NOXRED1Q6NXP6 359 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 TUBA3EQ6PEY2 450 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 OPN5Q6U736 354 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 FAM180AQ6UWF9 173 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 ZCCHC23Q6ZST2 131 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 OR4N5Q8IXE1 308 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 LRRC34Q8IZ02 419 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 Q8NA96 180 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 DNAJB8Q8NHS0 232 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 SLC22A8Q8TCC7 542 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 C16orf78Q8WTQ4 265 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 CXorf21Q9HAI6 301 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 TAS2R7Q9NYW3 318 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 UTS2RQ9UKP6 389 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 CES1P1Q9UKY3 287 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 FIS1Q9Y3D6 152 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 CCL27Q9Y4X3 112 aa13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 COPG1Q9Y678 874 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-216ENST00000626000 CAPN14A8MX76 684 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 PGRMC2O15173 223 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 VPS4BO75351 444 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 ITGA10O75578 1167 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 ERAL1O75616 437 aaKnown RBP13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 IL3P08700 152 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 IFI6P09912 130 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 NT5EP21589 574 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 MPIP34949 423 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 SLC1A6P48664 564 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 RAE1P78406 368 aaKnown RBP13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 OR1C1Q15619 314 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 HLA-DQA1Q5Y7H0 255 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 SCIMPQ6UWF3 145 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 VWA5B2Q8N398 1253 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 KIF2BQ8N4N8 673 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 NATD1Q8N6N6 113 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 BCORP1Q8N888 145 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 ANKRD42Q8N9B4 389 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 GALNT11Q8NCW6 608 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 C17orf47Q8NEP4 570 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 ZNF675Q8TD23 568 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 ZNF721Q8TF20 911 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 ASB15Q8WXK1 588 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 MTERF3Q96E29 417 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 FCRL1Q96LA6 429 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 ATP6V1G3Q96LB4 118 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 SGCZQ96LD1 299 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 PAIP2Q9BPZ3 127 aaKnown RBP13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 CNPPD1Q9BV87 410 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 LRFN1Q9P244 771 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 HAO1Q9UJM8 370 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 VPS4AQ9UN37 437 aa13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 KLF13Q9Y2Y9 288 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-216ENST00000626000 WDR91A4D1P6 747 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 SLCO1B7G3V0H7 640 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 PIP5K1BO14986 540 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 LSM1O15116 133 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 PRKRAO75569 313 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 LYPLA1O75608 230 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 RASAL1O95294 804 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 LINC00032P0C843 101 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 NTSP30990 170 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 CD96P40200 585 aa13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 TMED10P49755 219 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 RPL14P50914 215 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-216ENST00000626000 HK2P52789 917 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms