RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 RAB2BQ8WUD1 216 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 PROX1Q92786 737 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 UBE2FQ969M7 185 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 DCUN1D5Q9BTE7 237 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 ERVK-18Q9QC07 812 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 HCN4Q9Y3Q4 1203 aa18.63■□□□□ 0.57
PCDHB11-202ENST00000624887 PRAMEF27A3QJZ7 478 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 ARRDC5A6NEK1 342 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 SHISA7A6NL88 538 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 PROM1O43490 865 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 SLC28A2O43868 658 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 MRPS14O60783 128 aaKnown RBP18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 WBP4O75554 376 aaKnown RBP18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 CCNB2O95067 398 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 SEMA4FO95754 770 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 CDK4P11802 303 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 KCNJ5P48544 419 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 LIM2P55344 173 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 GANABQ14697 944 aaKnown RBP18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 SYPL1Q16563 259 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 SMN1Q16637 294 aaKnown RBP18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 PRRT3Q5FWE3 981 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 BHLHB9Q6PI77 547 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 DHRS4L2Q6PKH6 230 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 OR9Q2Q8NGE9 314 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 NT5CQ8TCD5 201 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 GAL3ST3Q96A11 431 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 TREX2Q9BQ50 279 aaPredicted RBP18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 CCNB1IP1Q9NPC3 277 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 RASSF1Q9NS23 344 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 ENTPD4Q9Y227 616 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 HEMK1Q9Y5R4 338 aaPredicted RBP18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 FANCMQ8IYD8 2048 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 OR2A25A4D2G3 310 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 TOR1BO14657 336 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 AXIN1O15169 862 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 MBTPS2O43462 519 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 NDUFS2O75306 463 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 GLULP15104 373 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 KRT20P35900 424 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 KHKP50053 298 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 CSNK2BP67870 215 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 SMAD4Q13485 552 aaKnown RBP18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 Q6ZSR6 202 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 OR5D16Q8NGK9 328 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 APH1BQ8WW43 257 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 XAGE5Q8WWM1 108 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 ZNF354BQ96LW1 612 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 OR2A14Q96R47 310 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 DGCR6LQ9BY27 220 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 ZNF556Q9HAH1 456 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 LYARQ9NX58 379 aaKnown RBP18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 USP36Q9P275 1121 aaKnown RBP18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 PCDHGA10Q9Y5H3 936 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 GPC6Q9Y625 555 aaPredicted RBP18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 LRP4O75096 1905 aa18.62■□□□□ 0.57
PCDHB11-202ENST00000624887 A0A1W2PPW3 197 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 FFAR1O14842 300 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 TNFSF14O43557 240 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 SERPINB7O75635 380 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 CSNK2A2P19784 350 aaPredicted RBP18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 FUT4P22083 530 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 CBLP22681 906 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 CD6P30203 668 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 GP2P55259 537 aaKnown RBP18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 DUSP2Q05923 314 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 RGS1Q08116 209 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 GPR19Q15760 415 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 FGD3Q5JSP0 725 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 COLEC12Q5KU26 742 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 Q6ZPB1 254 aaPredicted RBP18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 ASPGQ86U10 573 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 CCDC116Q8IYX3 515 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 KCT2Q8NC54 265 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 ZNF540Q8NDQ6 660 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 FAR1Q8WVX9 515 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 HMGB4Q8WW32 186 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 MOAP1Q96BY2 351 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 COL21A1Q96P44 957 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 FCRL4Q96PJ5 515 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 ALPK1Q96QP1 1244 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 UBE2ZQ9H832 354 aaPredicted RBP18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 GPN2Q9H9Y4 310 aaPredicted RBP18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 TRPC4Q9UBN4 977 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 RNF6Q9Y252 685 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 ZNF99A8MXY4 864 aaPredicted RBP18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 FAM20BO75063 409 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 INMTO95050 263 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 NR2F1P10589 423 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 CCNA2P20248 432 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 PPP2R1BP30154 601 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 ANXA11P50995 505 aaKnown RBP18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 BTN3A2P78410 334 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 CEBPEQ15744 281 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 ZNF750Q32MQ0 723 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 FBXO42Q6P3S6 717 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 PARP8Q8N3A8 854 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 IPCEF1Q8WWN9 437 aaPredicted RBP18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 FAM3CQ92520 227 aa18.61■□□□□ 0.57
PCDHB11-202ENST00000624887 FKBP10Q96AY3 582 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms