RNA–Protein interactions for RNA: ENST00000622963.3

SNHG5-213, Transcript of small nucleolar RNA host gene 5, human

TSL 5 BASIC

Gene SNHG5, Length 753 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-213	ENST00000622963	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.64	□□□□□ -0.71
SNHG5-213	ENST00000622963	SLC17A6	Q9P2U8	582 aa		10.64	□□□□□ -0.71
SNHG5-213	ENST00000622963	SLC22A14	Q9Y267	594 aa		10.64	□□□□□ -0.71
SNHG5-213	ENST00000622963	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963		A8MXE2	369 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	CASK	O14936	926 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	B3GALT2	O43825	422 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	FGF17	O60258	216 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	TNFSF13	O75888	250 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	CLPS	P04118	112 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	PAM	P19021	973 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	FPR1	P21462	350 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	CRYGS	P22914	178 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	CPOX	P36551	454 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	KCNJ1	P48048	391 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	RGS4	P49798	205 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	STXBP1	P61764	594 aa	Known RBP	10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	STX4	Q12846	297 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	SLBP	Q14493	270 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	ADPRM	Q3LIE5	342 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	CASC4	Q6P4E1	433 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	ABHD17C	Q6PCB6	329 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	SBSN	Q6UWP8	590 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	ZNF550	Q7Z398	422 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	UBE3D	Q7Z6J8	389 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	ADGRE4P	Q86SQ3	457 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	RNF10	Q8N5U6	811 aa	Known RBP	10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	SLC22A8	Q8TCC7	542 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	EDARADD	Q8WWZ3	215 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	CCT6B	Q92526	530 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	PPWD1	Q96BP3	646 aa	Known RBP	10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	FAR2	Q96K12	515 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	MAPKAP1	Q9BPZ7	522 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	SFXN3	Q9BWM7	321 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	CALHM2	Q9HA72	323 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	MRPS33	Q9Y291	106 aa	Known RBP	10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	DTX4	Q9Y2E6	619 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	C15orf41	Q9Y2V0	281 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	CR1	P17927	2039 aa		10.63	□□□□□ -0.71
SNHG5-213	ENST00000622963	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	PAX1	P15863	534 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	HIST1H2AD	P20671	130 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	MC3R	P41968	323 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	VPS41	P49754	854 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	FBXW4	P57775	412 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	IGLV3-21	P80748	117 aa	Predicted RBP	10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	SRSF2	Q01130	221 aa	Known RBP	10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	TRIP13	Q15645	432 aa	Predicted RBP	10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	NTRK2	Q16620	822 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	PPP1R3A	Q16821	1122 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	HSP90AA5P	Q58FG0	334 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	LRRC8E	Q6NSJ5	796 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	C20orf204	Q6ZNR8	217 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	SLCO4C1	Q6ZQN7	724 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	C1orf229	Q6ZS94	237 aa	Predicted RBP	10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	YRDC	Q86U90	279 aa	Known RBP	10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	HIPK1	Q86Z02	1210 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	TXLNB	Q8N3L3	684 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	OR2L5	Q8NG80	312 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	ABTB1	Q969K4	478 aa	Predicted RBP	10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	NTNG2	Q96CW9	530 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	HIST1H2AH	Q96KK5	128 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	RILP	Q96NA2	401 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	GAL3ST4	Q96RP7	486 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	SERINC2	Q96SA4	455 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	HIST1H2AJ	Q99878	128 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	H2AFJ	Q9BTM1	129 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	PRDM7	Q9NQW5	492 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	IARS2	Q9NSE4	1012 aa	Known RBP	10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	C20orf96	Q9NUD7	363 aa	Predicted RBP	10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	ZNF701	Q9NV72	531 aa	Predicted RBP	10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	CNIH4	Q9P003	139 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	CLCF1	Q9UBD9	225 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	COMMD10	Q9Y6G5	202 aa		10.62	□□□□□ -0.71
SNHG5-213	ENST00000622963	AP3B1	O00203	1094 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	RTCA	O00442	366 aa	Known RBP	10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	PRKRA	O75569	313 aa	Known RBP	10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	RCBTB2	O95199	551 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	PLAU	P00749	431 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	GDF5	P43026	501 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	MAGEA6	P43360	314 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	RPL21	P46778	160 aa	Known RBP	10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	MTTP	P55157	894 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	AP1S2	P56377	157 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	EBP	Q15125	230 aa	Known RBP	10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	SEL1L2	Q5TEA6	688 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	VWA1	Q6PCB0	445 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	ZNF474	Q6S9Z5	364 aa	Predicted RBP	10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	GAS2L3	Q86XJ1	694 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	PALM2	Q8IXS6	379 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	ZNF441	Q8N8Z8	693 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	GABPB2	Q8TAK5	448 aa	Predicted RBP	10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	ZPLD1	Q8TCW7	415 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	ATL1	Q8WXF7	558 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	DIO2	Q92813	273 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	F2RL3	Q96RI0	385 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	TSGA10	Q9BZW7	698 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	REXO4	Q9GZR2	422 aa	Known RBP	10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	WWTR1	Q9GZV5	400 aa		10.61	□□□□□ -0.71
SNHG5-213	ENST00000622963	COPS7A	Q9UBW8	275 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms