RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 KLHDC9Q8NEP7 349 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 OR9Q1Q8NGQ5 310 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 WDR20Q8TBZ3 569 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 KCNJ9Q92806 393 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 UPF1Q92900 1129 aaKnown RBP eCLIP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 EXOSC8Q96B26 276 aaKnown RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 SFXN2Q96NB2 322 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 YIPF4Q9BSR8 244 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 SARGQ9BW04 601 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 GSDMCQ9BYG8 508 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 ZYG11BQ9C0D3 744 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 ALX4Q9H161 411 aaPredicted RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 HHATLQ9HCP6 504 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 SEMA4BQ9NPR2 832 aaPredicted RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 C11orf16Q9NQ32 467 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 PRMT8Q9NR22 394 aaPredicted RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 NDUFB11Q9NX14 153 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 GPR83Q9NYM4 423 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 MED11Q9P086 117 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 PDP1Q9P0J1 537 aaPredicted RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 PLEKHB1Q9UF11 243 aaPredicted RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 SAMD4AQ9UPU9 718 aaKnown RBP7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 MED16Q9Y2X0 877 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 ASB1Q9Y576 335 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 PCDHGA2Q9Y5H1 932 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 NUBP2Q9Y5Y2 271 aa7.15□□□□□ -1.26
TRIM49B-202ENST00000622138 ANKRD36A6QL64 1941 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 TDRD15B5MCY1 1934 aaKnown RBP7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 TRBV23-1A0A0A0MS06 115 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 TCRBV16S1A1N1A0A5B0 115 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 M0QZQ0 153 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 UBE2CO00762 179 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 PHYHO14832 338 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 DPM1O60762 260 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 LILRB5O75023 590 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 POP7O75817 140 aaKnown RBP7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 TBX18O95935 607 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 HRGP04196 525 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 RHCEP18577 417 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 VAMP1P23763 118 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 CRYBB2P43320 205 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 PIK3CGP48736 1102 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 AGTR2P50052 363 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 SUOXP51687 545 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 AGFG1P52594 562 aaKnown RBP7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 RAG2P55895 527 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 MC2RQ01718 297 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 CDH18Q13634 790 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 KLHL26Q53HC5 615 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 DGKKQ5KSL6 1271 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 MARC1Q5VT66 337 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 HACD4Q5VWC8 232 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 C9orf131Q5VYM1 1079 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 GDF6Q6KF10 455 aaPredicted RBP7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 ABI3BPQ7Z7G0 1075 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 TMEM17Q86X19 198 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 SCN4BQ8IWT1 228 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 SKA3Q8IX90 412 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 PDZD9Q8IXQ8 264 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 SLC43A2Q8N370 569 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 TEX26Q8N6G2 289 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 TTC9BQ8N6N2 239 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 ZNF454Q8N9F8 522 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 TMEM163Q8TC26 289 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 ZDHHC1Q8WTX9 485 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 NUDT8Q8WV74 236 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 CPNE4Q96A23 557 aaPredicted RBP7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 THUMPD1Q9NXG2 353 aaKnown RBP7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 GALPQ9UBC7 116 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 SEC14L3Q9UDX4 400 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 BTNL2Q9UIR0 455 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 ZNF225Q9UK10 706 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 GABRQQ9UN88 632 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 PPIEQ9UNP9 301 aaKnown RBP7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 BACE2Q9Y5Z0 518 aa7.15□□□□□ -1.27
TRIM49B-202ENST00000622138 PLXNA3P51805 1871 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 LOC285095A0A1B0GVY8 99 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 LCHNA4D1U4 455 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 NPEPPSL1A6NEC2 478 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 SLC9B1P1A6NJY1 282 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 ARHGEF33A8MVX0 844 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 SUPT3HB4E1H0 165 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 TERTO14746 1132 aaKnown RBP7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 ADAMDEC1O15204 470 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 NIPSNAP2O75323 286 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 ECI2O75521 394 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 STX11O75558 287 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 CDRT1O95170 752 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 OAZ2O95190 189 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 KLK3P07288 261 aaPredicted RBP7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 HIST1H2AGP0C0S8 130 aaPredicted RBP7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 PEPDP12955 493 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 GABRB1P18505 474 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 HIST1H2ADP20671 130 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 PAICSP22234 425 aaKnown RBP7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 ATP5A1P25705 553 aaKnown RBP7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 APEX1P27695 318 aaKnown RBP7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 EPHA2P29317 976 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 CD52P31358 61 aa7.14□□□□□ -1.27
TRIM49B-202ENST00000622138 SSTR4P31391 388 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms