RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 TCP10LQ8TDR4 215 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 ASB15Q8WXK1 588 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 RBM18Q96H35 190 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 PAIP2Q9BPZ3 127 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 FARSBQ9NSD9 589 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 ZNF225Q9UK10 706 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 ERVK-11Q9UQG0 969 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 PLLPQ9Y342 182 aa16.65■□□□□ 0.26
SCAMP4-213ENST00000621748 ZNF407Q9C0G0 2248 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 A8MVJ9 347 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 KLRC4-KLRK1H3BQV0 150 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 PGRMC2O15173 223 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 SEMA3DO95025 777 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 AIFM1O95831 613 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 NR2F6P10588 404 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 ALOX15P16050 662 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 HSF1Q00613 529 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 IFT88Q13099 833 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 BIKQ13323 160 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 C3AR1Q16581 482 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 UNC50Q53HI1 259 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 CFAP157Q5JU67 520 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 ZNF787Q6DD87 383 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 SPPL2CQ8IUH8 684 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 CHERPQ8IWX8 916 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 ST13P4Q8IZP2 240 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 ANKRD42Q8N9B4 389 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 POGLUT1Q8NBL1 392 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 OR5L2Q8NGL0 311 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 TRPC4APQ8TEL6 797 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 CCDC120Q96HB5 630 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 FAM111AQ96PZ2 611 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 MRPL1Q9BYD6 325 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 MED4Q9NPJ6 270 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 TIMMDC1Q9NPL8 285 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 DEPPQ9NTK1 212 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 ZNF446Q9NWS9 450 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 HPF1Q9NWY4 346 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 TEX10Q9NXF1 929 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 COPS7AQ9UBW8 275 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 TINAGQ9UJW2 476 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 DNAJC13O75165 2243 aa16.64■□□□□ 0.25
SCAMP4-213ENST00000621748 A0A1W2PS29 197 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 DLX3O60479 287 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 PLIN3O60664 434 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 SASH3O75995 380 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 OTCP00480 354 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 PDYNP01213 254 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 KLK1P06870 262 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 NAA20P61599 178 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 HERVK_113P63132 956 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 PLIN5Q00G26 463 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 CLCQ05315 142 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 ZNF750Q32MQ0 723 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 ZNF678Q5SXM1 525 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 C10orf62Q5T681 223 aaPredicted RBP16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 Q6ZPB1 254 aaPredicted RBP16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 SH2D5Q6ZV89 423 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 FGD2Q7Z6J4 655 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 C9orf40Q8IXQ3 194 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 GPALPP1Q8IXQ4 340 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 ZFP62Q8NB50 900 aaPredicted RBP16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 PSD4Q8NDX1 1056 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 C16orf52Q8NHV5 167 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 ARL8AQ96BM9 186 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 TLCD1Q96CP7 247 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 FBXL20Q96IG2 436 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 SH3GL2Q99962 352 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 ERVK-6Q9BXR3 956 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 ELOVL6Q9H5J4 265 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 ITPR2Q14571 2701 aa16.63■□□□□ 0.25
SCAMP4-213ENST00000621748 ARHGAP10A1A4S6 786 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 PINLYPA6NC86 204 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 SUPT7LO94864 414 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 OR4F21O95013 312 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 PROCP04070 461 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 PTGER1P34995 402 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 DCTP40126 519 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 PRKAA2P54646 552 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 ERVK-8P63133 956 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 ZNF267Q14586 743 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 TNFAIP8L3Q5GJ75 292 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 PIGGQ5H8A4 983 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 ZYG11AQ6WRX3 759 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 GHDCQ8N2G8 530 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 METTL4Q8N3J2 472 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 ITLN2Q8WWU7 325 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 SELENOMQ8WWX9 145 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 MAGED4Q96JG8 741 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 TMEM237Q96Q45 408 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 CNPPD1Q9BV87 410 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 WDR41Q9HAD4 459 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 AHSPQ9NZD4 102 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 ADAM29Q9UKF5 820 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 SLC12A4Q9UP95 1085 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 ERVK-19Q9WJR5 959 aa16.62■□□□□ 0.25
SCAMP4-213ENST00000621748 NCOA6Q14686 2063 aaPredicted RBP16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 A0A0G2JMM0 328 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 A0A1W2PPB8 328 aa16.61■□□□□ 0.25
SCAMP4-213ENST00000621748 A0A1W2PRS3 328 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms