RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 FAM217AQ8IXS0 508 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 OR8B3Q8NGG8 313 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 TFGQ92734 400 aaPredicted RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 ZG16BQ96DA0 208 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 ZFP3Q96NJ6 502 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 ASB16Q96NS5 453 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 OR8B2Q96RD0 313 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 KCNK16Q96T55 309 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 KATNBL1Q9H079 304 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 ZMAT3Q9HA38 289 aaKnown RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 ACTL7BQ9Y614 415 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 PCM1Q15154 2024 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 A0A1W2PQJ5 194 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 SULT2B1O00204 365 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 STK17BO94768 372 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 TACSTD2P09758 323 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 TMIGD3P0DMS9 266 aaPredicted RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 ECHS1P30084 290 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 CDH11P55287 796 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 SMAGPQ0VAQ4 97 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 NPTX1Q15818 432 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 RTN4RL1Q86UN2 441 aaPredicted RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 RASGEF1CQ8N431 466 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 SHKBP1Q8TBC3 707 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 POC1BQ8TC44 478 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 SLC13A3Q8WWT9 602 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 ZNF606Q8WXB4 792 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 HAS1Q92839 578 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 SLC38A4Q969I6 547 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 UPRTQ96BW1 309 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 APOL4Q9BPW4 351 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 KIFC1Q9BW19 673 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 PAK1IP1Q9NWT1 392 aaPredicted RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 GSTK1Q9Y2Q3 226 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 H0YAE9 185 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 FAM87AP0C7U9 286 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 CSNK2A2P19784 350 aaPredicted RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 BRS3P32247 399 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 ZNF143P52747 638 aaPredicted RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 BST1Q10588 318 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 ABCA11PQ4W5N1 156 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 BOLLQ8N9W6 283 aaKnown RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 RCC1LQ96I51 464 aaKnown RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 CCSER2Q9H7U1 834 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 TAS2R10Q9NYW0 307 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 A4GNTQ9UNA3 340 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 EIF3FO00303 357 aaPredicted RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 SLC16A5O15375 505 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 HYAL3O43820 417 aaPredicted RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 PDLIM4P50479 330 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 VBP1P61758 197 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 ZNF211Q13398 564 aaPredicted RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 SLC5A12Q1EHB4 618 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 SULT1C3Q6IMI6 304 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 TSSK4Q6SA08 328 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 OLFML1Q6UWY5 402 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 TPRA1Q86W33 373 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 FOXRED2Q8IWF2 684 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 LSM14AQ8ND56 463 aaKnown RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 DQX1Q8TE96 717 aaKnown RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 OR1E3Q8WZA6 343 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 EXOSC8Q96B26 276 aaKnown RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 APOLD1Q96LR9 279 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 CAMK1GQ96NX5 476 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 OBP2BQ9NPH6 170 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 ZNF224Q9NZL3 707 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 TMED5Q9Y3A6 229 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 SRPX2O60687 465 aaPredicted RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 FAM20BO75063 409 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 LEFTY1O75610 366 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 PIGNO95427 931 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 EDN3P14138 238 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 SLC6A2P23975 617 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 EIF1P41567 113 aaKnown RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 PCYT1AP49585 367 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 NCBP2P52298 156 aaKnown RBP eCLIP3.19□□□□□ -1.9
LPP-220ENST00000617246 PIGGQ5H8A4 983 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 CSNK1A1LQ8N752 337 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 NPEPL1Q8NDH3 523 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 SCGB3A2Q96PL1 93 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 CUTCQ9NTM9 273 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 MARCOQ9UEW3 520 aaPredicted RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 ACTL7AQ9Y615 435 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 CPAMD8Q8IZJ3 1885 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 LDB3O75112 727 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 JCHAINP01591 159 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 TRBC1P01850 177 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 APOA2P02652 100 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 APEHP13798 732 aaKnown RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 ITPKAP23677 461 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 TFF2Q03403 129 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 CHAF1BQ13112 559 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 NFIL3Q16649 462 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 SDHAF4Q5VUM1 108 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 RGS7BPQ6MZT1 257 aaPredicted RBP3.19□□□□□ -1.9
LPP-220ENST00000617246 NDUFAF7Q7L592 441 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 TMEM158Q8WZ71 300 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 SLAMF9Q96A28 289 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 TPD52L3Q96J77 140 aa3.19□□□□□ -1.9
LPP-220ENST00000617246 UQCC2Q9BRT2 126 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms