RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 KLK1P06870 262 aa12.52□□□□□ -0.4
MSH6-214ENST00000616033 ALPPL2P10696 532 aa12.52□□□□□ -0.4
MSH6-214ENST00000616033 DCDC1P59894 354 aa12.52□□□□□ -0.4
MSH6-214ENST00000616033 RRAS2P62070 204 aaPredicted RBP12.52□□□□□ -0.4
MSH6-214ENST00000616033 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.52□□□□□ -0.4
MSH6-214ENST00000616033 PLD1Q13393 1074 aa12.52□□□□□ -0.4
MSH6-214ENST00000616033 TEAD4Q15561 434 aa12.52□□□□□ -0.4
MSH6-214ENST00000616033 CEACAM20Q6UY09 585 aa12.52□□□□□ -0.4
MSH6-214ENST00000616033 THOC6Q86W42 341 aaKnown RBP12.52□□□□□ -0.4
MSH6-214ENST00000616033 LRRC17Q8N6Y2 441 aa12.52□□□□□ -0.4
MSH6-214ENST00000616033 TTTY10Q9BZA0 68 aa12.52□□□□□ -0.4
MSH6-214ENST00000616033 MIEF1Q9NQG6 463 aa12.52□□□□□ -0.4
MSH6-214ENST00000616033 NUDT15Q9NV35 164 aa12.52□□□□□ -0.4
MSH6-214ENST00000616033 MRPL15Q9P015 296 aaKnown RBP12.52□□□□□ -0.4
MSH6-214ENST00000616033 TRPC4Q9UBN4 977 aa12.52□□□□□ -0.4
MSH6-214ENST00000616033 A0A0U1RQF3 1178 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 A0A1W2PPK0 400 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 RTCAO00442 366 aaKnown RBP12.52□□□□□ -0.41
MSH6-214ENST00000616033 SLC30A4O14863 429 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 CD160O95971 181 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 PKLRP30613 574 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 SPAM1P38567 509 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 TLE2Q04725 743 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 GALEQ14376 348 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 GINS1Q14691 196 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 GLYR1Q49A26 553 aaPredicted RBP12.52□□□□□ -0.41
MSH6-214ENST00000616033 BCL7CQ8WUZ0 217 aaPredicted RBP12.52□□□□□ -0.41
MSH6-214ENST00000616033 SMG7Q92540 1137 aaKnown RBP12.52□□□□□ -0.41
MSH6-214ENST00000616033 KAT2AQ92830 837 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 PPCDCQ96CD2 204 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 ZFP3Q96NJ6 502 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 PCDHB7Q9Y5E2 793 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 CHD5Q8TDI0 1954 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 DNAH14Q0VDD8 3507 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 POM121CA8CG34 1229 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 M0R3H8 397 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 COCHO43405 550 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 AKAP8O43823 692 aaKnown RBP12.52□□□□□ -0.41
MSH6-214ENST00000616033 C1QBP02746 253 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 HOXB9P17482 250 aaPredicted RBP12.52□□□□□ -0.41
MSH6-214ENST00000616033 ATF6P18850 670 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 IDSP22304 550 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 CPN2P22792 545 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 BHLHB9Q6PI77 547 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 COMMD7Q86VX2 200 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 PLCZ1Q86YW0 608 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 LINC00469Q8N7U9 141 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 OR4M2Q8NGB6 313 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 WDR48Q8TAF3 677 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.52□□□□□ -0.413e-7■■■■□ 20.1
MSH6-214ENST00000616033 GEMIN6Q8WXD5 167 aaKnown RBP12.52□□□□□ -0.41
MSH6-214ENST00000616033 EXTL2Q9UBQ6 330 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 PCDHB8Q9UN66 801 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 GSTK1Q9Y2Q3 226 aa12.52□□□□□ -0.41
MSH6-214ENST00000616033 RPL36Q9Y3U8 105 aaKnown RBP12.52□□□□□ -0.41
MSH6-214ENST00000616033 A0A1B0GVM2 712 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 EEF1E1O43324 174 aaKnown RBP12.51□□□□□ -0.41
MSH6-214ENST00000616033 GLAP06280 429 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 OR56A5P0C7T3 313 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 DRD5P21918 477 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 PCGF2P35227 344 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 FLT3LGP49771 235 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 SLC16A1P53985 500 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 VSX2P58304 361 aaPredicted RBP12.51□□□□□ -0.41
MSH6-214ENST00000616033 ERVFC1P60507 584 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 FABP5Q01469 135 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 DSG2Q14126 1118 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 LIPIQ6XZB0 460 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 TECPR1Q7Z6L1 1165 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 GDPD1Q8N9F7 314 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 XAGE5Q8WWM1 108 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 GDF15Q99988 308 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 MAPKAP1Q9BPZ7 522 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 TAPBPLQ9BX59 468 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 ABCG5Q9H222 651 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 TMEM245Q9H330 911 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 MVB12BQ9H7P6 319 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 RBFOX1Q9NWB1 397 aaKnown RBP12.51□□□□□ -0.41
MSH6-214ENST00000616033 NCKAP1Q9Y2A7 1128 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 TP53BP1Q12888 1972 aaPredicted RBP12.51□□□□□ -0.41
MSH6-214ENST00000616033 MTMR11A4FU01 709 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 ZAR1LA6NP61 321 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 HEPACAM2A8MVW5 462 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 SERPIND1P05546 499 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 KELP23276 732 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 NSG1P42857 185 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 SYTL3Q4VX76 610 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 OR4F15Q8NGB8 312 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 OR4C15Q8NGM1 316 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 SLC6A18Q96N87 628 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 USB1Q9BQ65 265 aaKnown RBP12.51□□□□□ -0.41
MSH6-214ENST00000616033 HTATIP2Q9BUP3 242 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 ZDHHC6Q9H6R6 413 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 ENPP4Q9Y6X5 453 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 VCANP13611 3396 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 C5orf42Q9H799 3197 aa12.51□□□□□ -0.41
MSH6-214ENST00000616033 FFAR1O14842 300 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 ADAM12O43184 909 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 FRS3O43559 492 aa12.5□□□□□ -0.41
MSH6-214ENST00000616033 LANCL1O43813 399 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms