RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 MYRFQ9Y2G1 1151 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 PCDHB7Q9Y5E2 793 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 URB2Q14146 1524 aaKnown RBP2.89□□□□□ -1.95
CBWD3-209ENST00000614377 SPATA31A5Q5VU36 1347 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 SPATA31A7Q8IWB4 1347 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 MAST1Q9Y2H9 1570 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 LOC100509620A0A075B734 347 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 A8MXK9 166 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 KRBOX1C9JBD0 128 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 K7EQM0 130 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 HCN1O60741 890 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 SDC3O75056 442 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 NDUFA10O95299 355 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 CSF1RP07333 972 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 SPARCP09486 303 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 NUDT17P0C025 328 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 IFNGR1P15260 489 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 NPPBP16860 134 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 SLC6A1P30531 599 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 RFC3P40938 356 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 MAGEA2P43356 314 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 RAP1GAPP47736 663 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 TMBIM6P55061 237 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 FGF8P55075 233 aaPredicted RBP2.89□□□□□ -1.95
CBWD3-209ENST00000614377 DLX5P56178 289 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 ABCE1P61221 599 aaKnown RBP2.89□□□□□ -1.95
CBWD3-209ENST00000614377 RAP1BP61224 184 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 CSTF1Q05048 431 aaKnown RBP2.89□□□□□ -1.95
CBWD3-209ENST00000614377 TGM3Q08188 693 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 SLAMF1Q13291 335 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 BOP1Q14137 746 aaKnown RBP2.89□□□□□ -1.95
CBWD3-209ENST00000614377 SOWAHAQ2M3V2 549 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 MGAT5BQ3V5L5 792 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 SLC9C1Q4G0N8 1177 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 CCDC157Q569K6 752 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 REP15Q6BDI9 236 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 CIAPIN1Q6FI81 312 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 LAMTOR1Q6IAA8 161 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 VWA1Q6PCB0 445 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 TMEM26Q6ZUK4 368 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 CHST9Q7L1S5 443 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 CYP4Z1Q86W10 505 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 IRF2BP1Q8IU81 584 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 ZC3H7AQ8IWR0 971 aaKnown RBP2.89□□□□□ -1.95
CBWD3-209ENST00000614377 ZZZ3Q8IYH5 903 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 SPAG16Q8N0X2 631 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 C17orf78Q8N4C9 275 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 TOP6BLQ8N6T0 577 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 C12orf76Q8N812 135 aaPredicted RBP2.89□□□□□ -1.95
CBWD3-209ENST00000614377 C1orf127Q8N9H9 656 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 UXS1Q8NBZ7 420 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 CAMKVQ8NCB2 501 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 BEND2Q8NDZ0 799 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 ITFG1Q8TB96 612 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 CFHR4Q92496 578 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 STMN2Q93045 179 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 RGMAQ96B86 450 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 NUDT11Q96G61 164 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 FBXL20Q96IG2 436 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 FAM46AQ96IP4 442 aaKnown RBP2.89□□□□□ -1.95
CBWD3-209ENST00000614377 SNX22Q96L94 193 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 GPR137Q96N19 417 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 WFIKKN1Q96NZ8 548 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 ZNF607Q96SK3 696 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 PRMT1Q99873 361 aaKnown RBP2.89□□□□□ -1.95
CBWD3-209ENST00000614377 APOL2Q9BQE5 337 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 XYLT2Q9H1B5 865 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 Q9H521 79 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 AKIRIN1Q9H9L7 192 aaPredicted RBP2.89□□□□□ -1.95
CBWD3-209ENST00000614377 SIRT7Q9NRC8 400 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 PNO1Q9NRX1 252 aaKnown RBP2.89□□□□□ -1.95
CBWD3-209ENST00000614377 ADARB2Q9NS39 739 aaKnown RBP2.89□□□□□ -1.95
CBWD3-209ENST00000614377 COPZ2Q9P299 210 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 DNAJB11Q9UBS4 358 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 CDH22Q9UJ99 828 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 PLA2G4CQ9UP65 541 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 WASF3Q9UPY6 502 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 PADI2Q9Y2J8 665 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 ASB1Q9Y576 335 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 AP4S1Q9Y587 144 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 OR51B4Q9Y5P0 310 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 TNFRSF18Q9Y5U5 241 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 HS3ST4Q9Y661 456 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 MYH9P35579 1960 aaKnown RBP2.89□□□□□ -1.95
CBWD3-209ENST00000614377 ABCB11O95342 1321 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 TIAM1Q13009 1591 aa2.89□□□□□ -1.95
CBWD3-209ENST00000614377 CIB4A0PJX0 185 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 TBC1D3FA6NER0 549 aaPredicted RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 C4orf47A7E2U8 309 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 CDRT15L2A8MXV6 281 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 PJA2O43164 708 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 MMP20O60882 483 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 SPAG7O75391 227 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 SEC14L2O76054 403 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 LY86O95711 162 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 B3GALT4O96024 378 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 FTLP02792 175 aaPredicted RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 RPLP2P05387 115 aaKnown RBP2.88□□□□□ -1.95
CBWD3-209ENST00000614377 FOLR2P14207 255 aa2.88□□□□□ -1.95
CBWD3-209ENST00000614377 UQCRC2P22695 453 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms