RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 FBXO45P0C2W1 286 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 GFAPP14136 432 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 ENDOUP21128 410 aaKnown RBP16.37■□□□□ 0.21
SSBP1-215ENST00000612337 BSGP35613 385 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 ALDH18A1P54886 795 aaKnown RBP16.37■□□□□ 0.21
SSBP1-215ENST00000612337 HERVK_113P63132 956 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 ERVK-8P63133 956 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 KCNJ2P63252 427 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 ACAP2Q15057 778 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 PCBP2Q15366 365 aaKnown RBP eCLIP16.37■□□□□ 0.21
SSBP1-215ENST00000612337 TRADDQ15628 312 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 PFKFB4Q16877 469 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 C1orf185Q5T7R7 199 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 MROH9Q5TGP6 573 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 ZNF559Q9BR84 538 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 ERVK-6Q9BXR3 956 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 WWTR1Q9GZV5 400 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 DDX31Q9H8H2 851 aaKnown RBP16.37■□□□□ 0.21
SSBP1-215ENST00000612337 PROK2Q9HC23 129 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 ZFP64Q9NPA5 681 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 PSD3Q9NYI0 1048 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 SPRR3Q9UBC9 169 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 Q9UFV3 132 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 ERVK-19Q9WJR5 959 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 ASB4Q9Y574 426 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 CHCHD2Q9Y6H1 151 aaPredicted RBP16.37■□□□□ 0.21
SSBP1-215ENST00000612337 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.37■□□□□ 0.21
SSBP1-215ENST00000612337 NINQ8N4C6 2090 aa16.37■□□□□ 0.21
SSBP1-215ENST00000612337 ZNF469Q96JG9 3925 aaPredicted RBP16.37■□□□□ 0.21
SSBP1-215ENST00000612337 ANKHD1Q8IWZ3 2542 aaKnown RBP16.37■□□□□ 0.21
SSBP1-215ENST00000612337 NF1P21359 2839 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 A0A1W2PR48 441 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 HMX2A2RU54 273 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 OR6C76A6NM76 312 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 TMPRSS11DO60235 418 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 OR10H2O60403 315 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 EEDO75530 441 aaKnown RBP16.36■□□□□ 0.21
SSBP1-215ENST00000612337 RFPL3SP0C7P2 107 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 NR2F6P10588 404 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 GABRA1P14867 456 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 SERPINB3P29508 390 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 GALNSP34059 522 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 ADH7P40394 386 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 SLC37A1P57057 533 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 CUL3Q13618 768 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 GTF2H2Q13888 395 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 ZNF267Q14586 743 aaPredicted RBP16.36■□□□□ 0.21
SSBP1-215ENST00000612337 EBPQ15125 230 aaKnown RBP16.36■□□□□ 0.21
SSBP1-215ENST00000612337 CPSF6Q16630 551 aaKnown RBP eCLIP16.36■□□□□ 0.21
SSBP1-215ENST00000612337 PRAMEF20Q5VT98 475 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 CES4AQ5XG92 561 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 GTF2H2CQ6P1K8 395 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 CYP20A1Q6UW02 462 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 RNF111Q6ZNA4 994 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 LRRC25Q8N386 305 aaPredicted RBP16.36■□□□□ 0.21
SSBP1-215ENST00000612337 FAM13CQ8NE31 585 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 OR10G3Q8NGC4 313 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 DOK4Q8TEW6 326 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 RIT1Q92963 219 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 GAL3ST4Q96RP7 486 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 EXO5Q9H790 373 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 ACKR4Q9NPB9 350 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 SNX15Q9NRS6 342 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 QPCTLQ9NXS2 382 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 PCDHGB3Q9Y5G1 929 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 TNPO3Q9Y5L0 923 aaKnown RBP16.36■□□□□ 0.21
SSBP1-215ENST00000612337 NCKAP5O14513 1909 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 ITPR3Q14573 2671 aa16.36■□□□□ 0.21
SSBP1-215ENST00000612337 LRRC14BA6NHZ5 514 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 LRRC3CA6NJW4 275 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 WASHC1A8K0Z3 465 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 FAM47E-STBD1D6RA91 191 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 FOXE1O00358 373 aaPredicted RBP16.35■□□□□ 0.21
SSBP1-215ENST00000612337 KLHL2O95198 593 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 FAM58BPP0C7Q3 252 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 SLC35E2P0CK97 266 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 PIK3CGP48736 1102 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 NTRK2Q16620 822 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 SLC25A35Q3KQZ1 300 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 METTL2BQ6P1Q9 378 aaKnown RBP16.35■□□□□ 0.21
SSBP1-215ENST00000612337 GOLGA7Q7Z5G4 137 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 NUDT13Q86X67 352 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 TAGAPQ8N103 731 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 PIP4P2Q8N4L2 257 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 L3MBTL4Q8NA19 623 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 MYRIPQ8NFW9 859 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 WDR20Q8TBZ3 569 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 GPR78Q96P69 363 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 IPPKQ9H8X2 491 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 WDR41Q9HAD4 459 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 ALKBH4Q9NXW9 302 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 CNOT11Q9UKZ1 510 aaKnown RBP16.35■□□□□ 0.21
SSBP1-215ENST00000612337 RNF11Q9Y3C5 154 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 ARHGAP21Q5T5U3 1957 aa16.35■□□□□ 0.21
SSBP1-215ENST00000612337 A0A096LPK6 155 aa16.34■□□□□ 0.21
SSBP1-215ENST00000612337 GLOD5A6NK44 160 aa16.34■□□□□ 0.21
SSBP1-215ENST00000612337 AIFM1O95831 613 aa16.34■□□□□ 0.21
SSBP1-215ENST00000612337 CLPSP04118 112 aa16.34■□□□□ 0.21
SSBP1-215ENST00000612337 CASQ1P31415 396 aa16.34■□□□□ 0.21
SSBP1-215ENST00000612337 MYBPHQ13203 477 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms