RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 TRIM40Q6P9F5 258 aa20.26■□□□□ 0.83
CBWD3-207ENST00000611426 CPSF7Q8N684 471 aaKnown RBP20.26■□□□□ 0.83
CBWD3-207ENST00000611426 OR2L5Q8NG80 312 aa20.26■□□□□ 0.83
CBWD3-207ENST00000611426 ACTRT2Q8TDY3 377 aa20.26■□□□□ 0.83
CBWD3-207ENST00000611426 ESAMQ96AP7 390 aa20.26■□□□□ 0.83
CBWD3-207ENST00000611426 MRPS33Q9Y291 106 aaKnown RBP20.26■□□□□ 0.83
CBWD3-207ENST00000611426 ZNF835Q9Y2P0 537 aa20.26■□□□□ 0.83
CBWD3-207ENST00000611426 TRBV11-1A0A0K0K1C0 115 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 ENO4A6NNW6 628 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 ATP5HO75947 161 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 ZNF24P17028 368 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 GRNP28799 593 aaKnown RBP20.25■□□□□ 0.83
CBWD3-207ENST00000611426 RNF165Q6ZSG1 346 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 RPS27LQ71UM5 84 aaKnown RBP20.25■□□□□ 0.83
CBWD3-207ENST00000611426 ZNF227Q86WZ6 799 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 SIAH3Q8IW03 269 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 SCUBE1Q8IWY4 988 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 ARMC10Q8N2F6 343 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 APCDD1LQ8NCL9 501 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 ADAMTS18Q8TE60 1221 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 TRPC4APQ8TEL6 797 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 PTCD3Q96EY7 689 aaKnown RBP20.25■□□□□ 0.83
CBWD3-207ENST00000611426 QRFPRQ96P65 431 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 NMUR2Q9GZQ4 415 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 TCF7L2Q9NQB0 619 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 FBXW2Q9UKT8 454 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 ZNF490Q9ULM2 529 aaPredicted RBP20.25■□□□□ 0.83
CBWD3-207ENST00000611426 ASB1Q9Y576 335 aa20.25■□□□□ 0.83
CBWD3-207ENST00000611426 ABCA12Q86UK0 2595 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 CAPN14A8MX76 684 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 TMEM233B4DJY2 109 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 SDHDO14521 159 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 AZIN1O14977 448 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 HNRNPCL1O60812 293 aaKnown RBP20.24■□□□□ 0.83
CBWD3-207ENST00000611426 DIAPH2O60879 1101 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 TBX6O95947 436 aaPredicted RBP20.24■□□□□ 0.83
CBWD3-207ENST00000611426 PRF1P14222 555 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 HTR1EP28566 365 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 DOC2AQ14183 400 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 HIST2H2ACQ16777 129 aaPredicted RBP20.24■□□□□ 0.83
CBWD3-207ENST00000611426 SPRED3Q2MJR0 410 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 ADPRMQ3LIE5 342 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 SLC9B1Q4ZJI4 515 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 HIST2H2AA3Q6FI13 130 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 XKRXQ6PP77 449 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 BNC2Q6ZN30 1099 aaPredicted RBP20.24■□□□□ 0.83
CBWD3-207ENST00000611426 Q6ZPB1 254 aaPredicted RBP20.24■□□□□ 0.83
CBWD3-207ENST00000611426 LRRC70Q7Z2Q7 622 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 VN1R5Q7Z5H4 357 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 ZNF595Q8IYB9 648 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 GHDCQ8N2G8 530 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 FAM47BQ8NA70 645 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 TMEM52Q8NDY8 209 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 VMP1Q96GC9 406 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 SERINC2Q96SA4 455 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 CCT7Q99832 543 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 COPS7BQ9H9Q2 264 aaPredicted RBP20.24■□□□□ 0.83
CBWD3-207ENST00000611426 MID1IP1Q9NPA3 183 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 MRGBPQ9NV56 204 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 APCP25054 2843 aa20.24■□□□□ 0.83
CBWD3-207ENST00000611426 GTF3C1Q12789 2109 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 K7EPI3 171 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 SLC22A2O15244 555 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 PRAMEF4O60810 478 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 ABOP16442 354 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 PPP2R1BP30154 601 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 HNRNPFP52597 415 aaKnown RBP20.23■□□□□ 0.83
CBWD3-207ENST00000611426 SMSP52788 366 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 MTTPP55157 894 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 ADORA2A-AS1P86434 159 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 BTKQ06187 659 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 TGM3Q08188 693 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 LAPTM5Q13571 262 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 GTF2H2Q13888 395 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 RNFT1Q5M7Z0 435 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 PRAMEF9Q5VWM5 478 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 ADNP2Q6IQ32 1131 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 GTF2H2CQ6P1K8 395 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 ABHD17CQ6PCB6 329 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 GPRIN3Q6ZVF9 776 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 ACAD11Q709F0 780 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 GOLGA7Q7Z5G4 137 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 MCEMP1Q8IX19 187 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 TMEM156Q8N614 296 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 NCLNQ969V3 563 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 WDR34Q96EX3 536 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 RILPQ96NA2 401 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 EFCAB11Q9BUY7 163 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 NTMT1Q9BV86 223 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 NUF2Q9BZD4 464 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 SHCBP1LQ9BZQ2 653 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 PRM3Q9NNZ6 103 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 CHST11Q9NPF2 352 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 OPTCQ9UBM4 332 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 ZNF225Q9UK10 706 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 PPIEQ9UNP9 301 aaKnown RBP20.23■□□□□ 0.83
CBWD3-207ENST00000611426 TRIM33Q9UPN9 1127 aa20.23■□□□□ 0.83
CBWD3-207ENST00000611426 KLF13Q9Y2Y9 288 aaPredicted RBP20.23■□□□□ 0.83
CBWD3-207ENST00000611426 KLRC4-KLRK1H3BQV0 150 aa20.22■□□□□ 0.83
CBWD3-207ENST00000611426 TGFBR3LH3BV60 316 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms