RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 ABCG8Q9H221 673 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 NXF3Q9H4D5 531 aaKnown RBP11.97□□□□□ -0.49
CTCFL-218ENST00000608440 CLN6Q9NWW5 311 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 DNAJC27Q9NZQ0 273 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 EXTL2Q9UBQ6 330 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 RPS6KA6Q9UK32 745 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 ACAD8Q9UKU7 415 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 LSM2Q9Y333 95 aaKnown RBP11.97□□□□□ -0.49
CTCFL-218ENST00000608440 SNX10Q9Y5X0 201 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 TNFRSF11BO00300 401 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 SULT1C2O00338 296 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 GLUD1P00367 558 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 GNRH1P01148 92 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 NDUFB7P17568 137 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 IL1RNP18510 177 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 C4BPBP20851 252 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 DRD5P21918 477 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 PAICSP22234 425 aaKnown RBP11.97□□□□□ -0.49
CTCFL-218ENST00000608440 GZMMP51124 257 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 ITGA1P56199 1179 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 RPS25P62851 125 aaKnown RBP11.97□□□□□ -0.49
CTCFL-218ENST00000608440 CAPSQ13938 189 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 SLC14A2Q15849 920 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 C3orf38Q5JPI3 329 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 ATG9BQ674R7 924 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 RAET1GQ6H3X3 334 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 USP30Q70CQ3 517 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 SSX9Q7RTT3 188 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 CALHM3Q86XJ0 350 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 OR9Q2Q8NGE9 314 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 OR14A16Q8NHC5 309 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 PIH1D2Q8WWB5 315 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 DPH2Q9BQC3 489 aaPredicted RBP11.97□□□□□ -0.49
CTCFL-218ENST00000608440 DPAGT1Q9H3H5 408 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 TAS2R3Q9NYW6 316 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 CPA4Q9UI42 421 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 PCDHB7Q9Y5E2 793 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 SPIN1Q9Y657 262 aaPredicted RBP11.97□□□□□ -0.49
CTCFL-218ENST00000608440 LRRC37A2A6NM11 1700 aa11.97□□□□□ -0.49
CTCFL-218ENST00000608440 ZNF638Q14966 1978 aaKnown RBP11.96□□□□□ -0.49
CTCFL-218ENST00000608440 LOC285095A0A1B0GVY8 99 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 GABRR3A8MPY1 467 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 ADAM12O43184 909 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 ECI2O75521 394 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 FBP1P09467 338 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 HPGDP15428 266 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 BPIP17213 487 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 ADORA2BP29275 332 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 FEN1P39748 380 aaKnown RBP11.96□□□□□ -0.49
CTCFL-218ENST00000608440 DUSP4Q13115 394 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 RAB33AQ14088 237 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 ZCCHC12Q6PEW1 402 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 DEF8Q6ZN54 512 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 CILP2Q8IUL8 1156 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 PUSL1Q8N0Z8 303 aaKnown RBP11.96□□□□□ -0.49
CTCFL-218ENST00000608440 SLC35F5Q8WV83 523 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 WDR89Q96FK6 387 aaPredicted RBP11.96□□□□□ -0.49
CTCFL-218ENST00000608440 CHMP1AQ9HD42 196 aaPredicted RBP11.96□□□□□ -0.49
CTCFL-218ENST00000608440 POLE3Q9NRF9 147 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 RCOR3Q9P2K3 495 aaPredicted RBP11.96□□□□□ -0.49
CTCFL-218ENST00000608440 TMEM82A0PJX8 343 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 CDC7O00311 574 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 TFP02787 698 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 S100A8P05109 93 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 MMP12P39900 470 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 CDKN2CP42773 168 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 AKR1C2P52895 323 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 TPI1P60174 286 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 ERVPABLB-1P60509 514 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 AKR1C1Q04828 323 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 HLXQ14774 488 aaPredicted RBP11.96□□□□□ -0.49
CTCFL-218ENST00000608440 PTGES3Q15185 160 aaKnown RBP11.96□□□□□ -0.49
CTCFL-218ENST00000608440 GCNT6Q5T4J0 391 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 PDZD4Q76G19 769 aaPredicted RBP11.96□□□□□ -0.49
CTCFL-218ENST00000608440 ARMCX2Q7L311 632 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 CHST14Q8NCH0 376 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 DNAJB8Q8NHS0 232 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 ELP5Q8TE02 316 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 RFT1Q96AA3 541 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 HPDLQ96IR7 371 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 RHOVQ96L33 236 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 CPPED1Q9BRF8 314 aaPredicted RBP11.96□□□□□ -0.49
CTCFL-218ENST00000608440 CPEB1Q9BZB8 566 aaKnown RBP11.96□□□□□ -0.49
CTCFL-218ENST00000608440 ZNF334Q9HCZ1 680 aaPredicted RBP11.96□□□□□ -0.49
CTCFL-218ENST00000608440 ENAMQ9NRM1 1142 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 FAM50BQ9Y247 325 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 SNX11Q9Y5W9 270 aa11.96□□□□□ -0.49
CTCFL-218ENST00000608440 MCM3APO60318 1980 aa11.96□□□□□ -0.5
CTCFL-218ENST00000608440 METTL21EPA6NDL7 271 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ARGFXA6NJG6 315 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ZNF729A6NN14 1252 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 C2orf74A8MZ97 194 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 M0QYT0 321 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 CASC3O15234 703 aaKnown RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 HCRTO43612 131 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 SEMA7AO75326 666 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 RP2O75695 350 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 POP4O95707 220 aaKnown RBP11.95□□□□□ -0.5
CTCFL-218ENST00000608440 IL6P05231 212 aa11.95□□□□□ -0.5
CTCFL-218ENST00000608440 ACSL1P33121 698 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms