RNA–Protein interactions for RNA: ENST00000606699.5

NECAB3-220, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,022 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-220ENST00000606699 LIME1Q9H400 295 aa17.1■□□□□ 0.33
NECAB3-220ENST00000606699 LDAHQ9H6V9 325 aa17.1■□□□□ 0.33
NECAB3-220ENST00000606699 NT5DC2Q9H857 520 aa17.1■□□□□ 0.33
NECAB3-220ENST00000606699 OPTCQ9UBM4 332 aa17.1■□□□□ 0.33
NECAB3-220ENST00000606699 A0A0G2JMM0 328 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 A0A1W2PPB8 328 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 A0A1W2PRS3 328 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 KIR3DP1A8MWS1 328 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 CYR61O00622 381 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 CLGNO14967 610 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 ERI3O43414 337 aaKnown RBP17.09■□□□□ 0.33
NECAB3-220ENST00000606699 PROM1O43490 865 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 SIX3O95343 332 aaPredicted RBP17.09■□□□□ 0.33
NECAB3-220ENST00000606699 DRD2P14416 443 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 EPORP19235 508 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 HNRNPFP52597 415 aaKnown RBP17.09■□□□□ 0.33
NECAB3-220ENST00000606699 TBL3Q12788 808 aaKnown RBP17.09■□□□□ 0.33
NECAB3-220ENST00000606699 TMIGD1Q6UXZ0 262 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 SLCO4C1Q6ZQN7 724 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 WDR53Q7Z5U6 358 aaPredicted RBP17.09■□□□□ 0.33
NECAB3-220ENST00000606699 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.09■□□□□ 0.332e-6■■■■■ 163.7
NECAB3-220ENST00000606699 CNPY4Q8N129 248 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 RIBC1Q8N443 379 aaPredicted RBP17.09■□□□□ 0.33
NECAB3-220ENST00000606699 PTGR2Q8N8N7 351 aaPredicted RBP17.09■□□□□ 0.33
NECAB3-220ENST00000606699 PHF21BQ96EK2 531 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 LRRC46Q96FV0 321 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 QRFPRQ96P65 431 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 SERINC2Q96SA4 455 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 ALOXE3Q9BYJ1 711 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 GPRC5BQ9NZH0 403 aa17.09■□□□□ 0.33
NECAB3-220ENST00000606699 RPH3AQ9Y2J0 694 aaPredicted RBP17.09■□□□□ 0.33
NECAB3-220ENST00000606699 TRGV5A0A0B4J1U4 118 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 ATP6AP2A0A1C7CYW4 349 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 HSPB2A8KAH6 182 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 G3V3Y1 287 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 K7EPI3 171 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 PRAMEF4O60810 478 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 SMIM24O75264 130 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 CLEC3AO75596 197 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 ATP6AP2O75787 350 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 HNRNPH1P31943 449 aaKnown RBP17.08■□□□□ 0.32
NECAB3-220ENST00000606699 LIM2P55344 173 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 RNF4P78317 190 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 SERTAD2Q14140 314 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 SLBPQ14493 270 aaKnown RBP eCLIP17.08■□□□□ 0.32
NECAB3-220ENST00000606699 HSPB2Q16082 182 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 MPEG1Q2M385 716 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 ADPRMQ3LIE5 342 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 PRAMEF9Q5VWM5 478 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 SH2D5Q6ZV89 423 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 C4orf33Q8N1A6 199 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 KRT78Q8N1N4 520 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 TMEM151AQ8N4L1 468 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 TEX9Q8N6V9 391 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 FAM47BQ8NA70 645 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 OR2L5Q8NG80 312 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 FAM222BQ8WU58 562 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 ZBTB9Q96C00 473 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 CAPS2Q9BXY5 557 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 ROPN1BQ9BZX4 212 aaPredicted RBP17.08■□□□□ 0.32
NECAB3-220ENST00000606699 REXO4Q9GZR2 422 aaKnown RBP17.08■□□□□ 0.32
NECAB3-220ENST00000606699 ROPN1Q9HAT0 212 aaPredicted RBP17.08■□□□□ 0.32
NECAB3-220ENST00000606699 RYDENQ9NUL5 291 aaKnown RBP17.08■□□□□ 0.32
NECAB3-220ENST00000606699 CRIM1Q9NZV1 1036 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 LGALS13Q9UHV8 139 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 DAPP1Q9UN19 280 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 ATG4BQ9Y4P1 393 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 VPS13CQ709C8 3753 aa17.08■□□□□ 0.32
NECAB3-220ENST00000606699 A0A0G2JN53 185 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 ANKDD1BA6NHY2 528 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 A6NNC1 897 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 GLRA3O75311 464 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 ERLIN1O75477 346 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 GSTA1P08263 222 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 DGKQP52824 942 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 MTTPP55157 894 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 ADAM8P78325 824 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 STX4Q12846 297 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 CHIT1Q13231 466 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 DOC2AQ14183 400 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 PCBP2Q15366 365 aaKnown RBP eCLIP17.07■□□□□ 0.324e-8■■■□□ 17.6
NECAB3-220ENST00000606699 TRIM40Q6P9F5 258 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 CLNKQ7Z7G1 428 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 LCA5Q86VQ0 697 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 CDC20BQ86Y33 519 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 CCT6BQ92526 530 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 GSX1Q9H4S2 264 aaPredicted RBP17.07■□□□□ 0.32
NECAB3-220ENST00000606699 ALKBH4Q9NXW9 302 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 TUBA8Q9NY65 449 aaPredicted RBP17.07■□□□□ 0.32
NECAB3-220ENST00000606699 DCDC2Q9UHG0 476 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 FOXD3Q9UJU5 478 aaPredicted RBP17.07■□□□□ 0.32
NECAB3-220ENST00000606699 TMCO1Q9UM00 188 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 PLEKHA6Q9Y2H5 1048 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 ANGPTL3Q9Y5C1 460 aa17.07■□□□□ 0.32
NECAB3-220ENST00000606699 FLNAP21333 2647 aaKnown RBP17.07■□□□□ 0.32
NECAB3-220ENST00000606699 A8MT66 165 aa17.06■□□□□ 0.32
NECAB3-220ENST00000606699 CELA3AP09093 270 aa17.06■□□□□ 0.32
NECAB3-220ENST00000606699 EPB42P16452 691 aa17.06■□□□□ 0.32
NECAB3-220ENST00000606699 KRT4P19013 534 aa17.06■□□□□ 0.32
NECAB3-220ENST00000606699 CD22P20273 847 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms