RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 PROP1O75360 226 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 LDLRP01130 860 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 TPM1P09493 284 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 RHOXF2BP0C7M4 288 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 UBTFL1P0CB47 393 aaPredicted RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 STAG3L3P0CL85 134 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 KRT3P12035 628 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 IRF2P14316 349 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 IL9P15248 144 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 GOT1P17174 413 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 CKMT2P17540 419 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 CEBPBP17676 345 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 HNF1AP20823 631 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 DGKAP23743 735 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 ADORA1P30542 326 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 DUTP33316 252 aaKnown RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 CHI3L1P36222 383 aaPredicted RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 CHRNA7P36544 502 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 CAPGP40121 348 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 PTGFRP43088 359 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 SSR1P43307 286 aaKnown RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 GLIPR1P48060 266 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 ACADVLP49748 655 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 NUMBP49757 651 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 SUCLG1P53597 346 aaKnown RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 HADHBP55084 474 aaKnown RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 EIF3EP60228 445 aaKnown RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 HAND2P61296 217 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 HERV-K104P63124 156 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 CBX1P83916 185 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 ZXDBP98169 803 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 MYBPC1Q00872 1141 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 RELQ04864 619 aaPredicted RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 MBTD1Q05BQ5 628 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 SLC3A1Q07837 685 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 SELPLGQ14242 412 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 SQLEQ14534 574 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 TPD52L1Q16890 204 aaPredicted RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 AGKQ53H12 422 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 PHYHD1Q5SRE7 291 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 ARMC12Q5T9G4 340 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 NKAIN2Q5VXU1 208 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 SEL1L3Q68CR1 1132 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 C11orf63Q6NUN7 778 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 NIPAL3Q6P499 406 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 ZNF704Q6ZNC4 412 aaPredicted RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 CDHR3Q6ZTQ4 885 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 BNIPLQ7Z465 357 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 NANOGNBQ7Z5D8 188 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 TMCO2Q7Z6W1 182 aaPredicted RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 YRDCQ86U90 279 aaKnown RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 FAM228AQ86W67 206 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 FAM131BQ86XD5 332 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 CROCCP3Q8IVE0 287 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 ADHFE1Q8IWW8 467 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 C1orf52Q8N6N3 182 aaKnown RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 MNS1Q8NEH6 495 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 TMEM163Q8TC26 289 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 ACER1Q8TDN7 264 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 SLC44A1Q8WWI5 657 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 MAP4K1Q92918 833 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 THOC1Q96FV9 657 aaKnown RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 PGM2Q96G03 612 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 CASD1Q96PB1 797 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 MTERF1Q99551 399 aaKnown RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 NDNQ99608 321 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 RHOXF2Q9BQY4 288 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 PRRG4Q9BZD6 226 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 MAGT1Q9H0U3 335 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 ACTL8Q9H568 366 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 EXO5Q9H790 373 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 APMAPQ9HDC9 416 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 HPS4Q9NQG7 708 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 DDX28Q9NUL7 540 aaKnown RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 ACOXLQ9NUZ1 547 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 TMEM51Q9NW97 253 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 PKD2L2Q9NZM6 624 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 KLHL9Q9P2J3 617 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 TMED7Q9Y3B3 224 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 TMED3Q9Y3Q3 217 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 LOXL2Q9Y4K0 774 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 MCM3APO60318 1980 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 UMODL1Q5DID0 1318 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 SCN5AQ14524 2016 aa3.59□□□□□ -1.83
IGHV3-29-201ENST00000604817 COL11A1P12107 1806 aaPredicted RBP3.58□□□□□ -1.84
IGHV3-29-201ENST00000604817 TRAV18A0A075B6X5 111 aa3.58□□□□□ -1.84
IGHV3-29-201ENST00000604817 ANTXRLA6NF34 631 aa3.58□□□□□ -1.84
IGHV3-29-201ENST00000604817 ANKRD66B4E2M5 251 aa3.58□□□□□ -1.84
IGHV3-29-201ENST00000604817 M0R296 226 aa3.58□□□□□ -1.84
IGHV3-29-201ENST00000604817 EEF2KO00418 725 aaKnown RBP3.58□□□□□ -1.84
IGHV3-29-201ENST00000604817 POLR2DO15514 142 aaKnown RBP3.58□□□□□ -1.84
IGHV3-29-201ENST00000604817 ZIC3O60481 467 aa3.58□□□□□ -1.84
IGHV3-29-201ENST00000604817 SNX3O60493 162 aa3.58□□□□□ -1.84
IGHV3-29-201ENST00000604817 SDC3O75056 442 aa3.58□□□□□ -1.84
IGHV3-29-201ENST00000604817 FLOT1O75955 427 aa3.58□□□□□ -1.84
IGHV3-29-201ENST00000604817 SYNGR4O95473 234 aa3.58□□□□□ -1.84
IGHV3-29-201ENST00000604817 CPNE6O95741 557 aa3.58□□□□□ -1.84
IGHV3-29-201ENST00000604817 GOT2P00505 430 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms