RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 XDHP47989 1333 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 A0A1W2PPV4 95 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 SAGE2PA6NJ88 616 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 PDZK1P1A8MUH7 402 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CST8O60676 142 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 GH1P01241 217 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 S100A8P05109 93 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF30P17039 623 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ERP29P30040 261 aaKnown RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 THBS2P35442 1172 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 GPX4P36969 197 aaPredicted RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CEACAM3P40198 252 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 SLC1A4P43007 532 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 KIR3DL2P43630 455 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 UCP3P55916 312 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 GPC5P78333 572 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 SIM1P81133 766 aaPredicted RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ILF2Q12905 390 aaKnown RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 TRAM2Q15035 370 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 PTPRRQ15256 657 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF181Q2M3W8 571 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 PLCXD3Q63HM9 321 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 HIST2H2BCQ6DN03 193 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 HIST2H2BDQ6DRA6 164 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CDC73Q6P1J9 531 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 TEX38Q6PEX7 206 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CENPUQ71F23 418 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 POLNQ7Z5Q5 900 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 NT5DC3Q86UY8 548 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 BOD1L2Q8IYS8 172 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 RP9Q8TA86 221 aaKnown RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 UBA3Q8TBC4 463 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CA5BP1Q8WTZ4 195 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 DNASE1L2Q92874 299 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CERS2Q96G23 380 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ST6GAL2Q96JF0 529 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CRAMP1Q96RY5 1269 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CYP2S1Q96SQ9 504 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 FAM110AQ9BQ89 295 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 NPLQ9BXD5 320 aaPredicted RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 HDHD2Q9H0R4 259 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 MMP27Q9H306 513 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ZFYVE1Q9HBF4 777 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CHMP1AQ9HD42 196 aaPredicted RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 NT5MQ9NPB1 228 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 CCNB1IP1Q9NPC3 277 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 EXD2Q9NVH0 621 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 SPATA6Q9NWH7 488 aaPredicted RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ANKFY1Q9P2R3 1169 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 SLC17A7Q9P2U7 560 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ERRFI1Q9UJM3 462 aaPredicted RBP4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 FBXW11Q9UKB1 542 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 LAMB4A4D0S4 1761 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 MYH3P11055 1940 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 MRC1P22897 1456 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 ZMYM2Q9UBW7 1377 aa4.77□□□□□ -1.65
SPTBN1-206ENST00000602898 RPTORQ8N122 1335 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 PLSCR5A0PG75 271 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 KLF11O14901 512 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 RGS5O15539 181 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 PEX10O60683 326 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 VPS26AO75436 327 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ZFPL1O95159 310 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ZBTB7AO95365 584 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CCNE2O96020 404 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 MT-ND2P03891 347 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ALDOAP04075 364 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CYP2C8P10632 490 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CEACAM1P13688 526 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SLC2A4P14672 509 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 IL7RP16871 459 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ZP3P21754 424 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CD80P33681 288 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 PPP3CCP48454 512 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 METAP2P50579 478 aaKnown RBP eCLIP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 SESN2P58004 480 aaPredicted RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ADORA2A-AS1P86434 159 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 MAT1AQ00266 395 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 KLRC3Q07444 240 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 BTN1A1Q13410 526 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 CCNIQ14094 377 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 GK3PQ14409 553 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 PPP1R3AQ16821 1122 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 AMZ1Q400G9 498 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 FCRL6Q6DN72 434 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 GPAT2Q6NUI2 795 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 TTC33Q6PID6 262 aaPredicted RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 TSSK4Q6SA08 328 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 PAQR3Q6TCH7 311 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 TREML4Q6UXN2 200 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 ABHD15Q6UXT9 468 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 LIPIQ6XZB0 460 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 KCTD8Q6ZWB6 473 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 DYMQ7RTS9 669 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 RBM45Q8IUH3 476 aaKnown RBP4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 MFSD4AQ8N468 514 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 COLGALT1Q8NBJ5 622 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 TMEM35BQ8NCS4 154 aa4.76□□□□□ -1.65
SPTBN1-206ENST00000602898 RNASE11Q8TAA1 199 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms