RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 GTF2H2Q13888 395 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 SETDB1Q15047 1291 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 C1orf185Q5T7R7 199 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 LIPJQ5W064 366 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 GTF2H2CQ6P1K8 395 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 GOLGA7Q7Z5G4 137 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 LIX1LQ8IVB5 337 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 CENPLQ8N0S6 344 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 CLYBLQ8N0X4 340 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 LIX1Q8N485 282 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 ACBD4Q8NC06 268 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 NUBPLQ8TB37 319 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 REPS1Q96D71 796 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 FBXL20Q96IG2 436 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 CDK15Q96Q40 435 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 WDR41Q9HAD4 459 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 SNX15Q9NRS6 342 aa16.2■□□□□ 0.18
SHKBP1-223ENST00000600552 A0A096LPK6 155 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 A0A1B0GVC2 190 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 TMPRSS11DO60235 418 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 TRAPPC6AO75865 159 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 IGKV3-11P04433 115 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 HOXD4P09016 255 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 SERPINB3P29508 390 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 TYK2P29597 1187 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 ADH7P40394 386 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 E2F2Q14209 437 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 SGO1Q5FBB7 561 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 CES4AQ5XG92 561 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 HLA-DQA1Q5Y7H0 255 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 KLC3Q6P597 504 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 SYT10Q6XYQ8 523 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 ST13P4Q8IZP2 240 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 ZCCHC7Q8N3Z6 543 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 C7orf57Q8NEG2 295 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 TREX2Q9BQ50 279 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 WWTR1Q9GZV5 400 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 ZFP64Q9NPA5 681 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 LYARQ9NX58 379 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 ASB4Q9Y574 426 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 SPG11Q96JI7 2443 aa16.19■□□□□ 0.18
SHKBP1-223ENST00000600552 HIVEP1P15822 2718 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 C15orf38-AP3S2A0A0A6YYH1 394 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 A0A1W2PS29 197 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 PGRMC2O15173 223 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 KLK8O60259 260 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 SUSD5O60279 629 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 WDR1O75083 606 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 AIFM1O95831 613 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 IGFBP2P18065 325 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 GDF1P27539 372 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 SSTR4P31391 388 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 BSGP35613 385 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 ALDH18A1P54886 795 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 BIKQ13323 160 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 NAB1Q13506 487 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 ACAP2Q15057 778 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 TOMM20Q15388 145 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 TTC19Q6DKK2 380 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 LYPD8Q6UX82 237 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 FBXW8Q8N3Y1 598 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 SLC15A4Q8N697 577 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 PAQR8Q8TEZ7 354 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 DIO2Q92813 273 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 PHF21BQ96EK2 531 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 PELOQ9BRX2 385 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 DOHHQ9BU89 302 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 NOL11Q9H8H0 719 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 CELSR1Q9NYQ6 3014 aa16.18■□□□□ 0.18
SHKBP1-223ENST00000600552 A0A0A6YYD5 115 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 C2orf92A0A1B0GVN3 265 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 HCN1O60741 890 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 KLHL2O95198 593 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 FBXO45P0C2W1 286 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 ENDOUP21128 410 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 PIK3R1P27986 724 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 UQCRC1P31930 480 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 WNT3P56703 355 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 RIPPLY3P57055 190 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 FBXW4P57775 412 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 HYAL4Q2M3T9 481 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 TMEM198Q66K66 360 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 BICRALQ6AI39 1079 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 ADGRD1Q6QNK2 874 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 NUDT13Q86X67 352 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 ZZZ3Q8IYH5 903 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 PRR22Q8IZ63 422 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 TAGAPQ8N103 731 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 PTGR2Q8N8N7 351 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 RHEBL1Q8TAI7 183 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 ZNF703Q9H7S9 590 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 PROK2Q9HC23 129 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 ZNF358Q9NW07 568 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 CNIH4Q9P003 139 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 B4GALT7Q9UBV7 327 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 C2CD3Q4AC94 2353 aa16.17■□□□□ 0.18
SHKBP1-223ENST00000600552 HMX2A2RU54 273 aa16.16■□□□□ 0.18
SHKBP1-223ENST00000600552 LRRC3CA6NJW4 275 aa16.16■□□□□ 0.18
SHKBP1-223ENST00000600552 H0YIV9 168 aa16.16■□□□□ 0.18
SHKBP1-223ENST00000600552 CLDN9O95484 217 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms