RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PIP5K1AQ99755 562 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 TUBA1CQ9BQE3 449 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 NMNAT1Q9HAN9 279 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 ACOT13Q9NPJ3 140 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 SCHIP1Q9P0W5 487 aaPredicted RBP10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 SLC13A4Q9UKG4 626 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 MAPRE3Q9UPY8 281 aa10.94□□□□□ -0.66
ARHGEF1-220ENST00000600274 NTN1O95631 604 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 OXSR1O95747 527 aaPredicted RBP10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ACADMP11310 421 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 GTF2E2P29084 291 aaKnown RBP10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 BCL6P41182 706 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 RAB28P51157 221 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 TIGD6Q17RP2 521 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 MICAQ29983 383 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ZNF793Q6ZN11 406 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ZNF765Q7L2R6 523 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 GATAD2AQ86YP4 633 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 RASGRP3Q8IV61 690 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 KCT2Q8NC54 265 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 CEP19Q96LK0 163 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 HHIPQ96QV1 700 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 IL20RAQ9UHF4 553 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ENPP5Q9UJA9 477 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ATG4BQ9Y4P1 393 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 PLXND1Q9Y4D7 1925 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 SMIM30A4D0T7 59 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 EFCAB9A8MZ26 197 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 TMEM229AB2RXF0 380 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 EML2O95834 649 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ARAFP10398 606 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 PCMT1P22061 227 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 FCARP24071 287 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 NTSP30990 170 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 LIM2P55344 173 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ZNF33BQ06732 778 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 DLX2Q07687 328 aaPredicted RBP10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 FADDQ13158 208 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 SLC9A5Q14940 896 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 PTGES3Q15185 160 aaKnown RBP10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 DUSP6Q16828 381 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ZNF776Q68DI1 518 aaPredicted RBP10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 OR4C11Q6IEV9 310 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ADAMTSL4Q6UY14 1074 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 SLC16A12Q6ZSM3 486 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 LACC1Q8IV20 430 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 UBE2J2Q8N2K1 259 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 HCAR2Q8TDS4 363 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 PATE1Q8WXA2 126 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 SLC9A6Q92581 669 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 CHST8Q9H2A9 424 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 GIN1Q9NXP7 522 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ENTPD4Q9Y227 616 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 CXorf51AA0A1B0GTR3 108 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 HTR3EA5X5Y0 456 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 TRIM64A6NGJ6 449 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 AIREO43918 545 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 PPP2R1BP30154 601 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 LIPAP38571 399 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 NR4A2P43354 598 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 AVPR1BP47901 424 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 GABARAPL2P60520 117 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 KEAP1Q14145 624 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 LTB4RQ15722 352 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 CLEC12AQ5QGZ9 265 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 DCST1Q5T197 706 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 MCFD2Q8NI22 146 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 WDR36Q8NI36 951 aaKnown RBP10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 APH1BQ8WW43 257 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 RAB7BQ96AH8 199 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 SIPA1Q96FS4 1042 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 COX14Q96I36 57 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 QRFPRQ96P65 431 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ZNF347Q96SE7 839 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 EPYCQ99645 322 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 SMAD5Q99717 465 aaKnown RBP10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 HDAC8Q9BY41 377 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 GLIPR2Q9H4G4 154 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ACER3Q9NUN7 267 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 TBCCD1Q9NVR7 557 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 TVP23BQ9NYZ1 205 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 GDE1Q9NZC3 331 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 TMEM9Q9P0T7 183 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ERGIC3Q9Y282 383 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 ENPP4Q9Y6X5 453 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 PTPRSQ13332 1948 aa10.93□□□□□ -0.66
ARHGEF1-220ENST00000600274 CACNA1IQ9P0X4 2223 aa10.92□□□□□ -0.66
ARHGEF1-220ENST00000600274 MTCL1Q9Y4B5 1905 aaKnown RBP10.92□□□□□ -0.66
ARHGEF1-220ENST00000600274 TFECO14948 347 aaPredicted RBP10.92□□□□□ -0.66
ARHGEF1-220ENST00000600274 B4GALT2O60909 372 aa10.92□□□□□ -0.66
ARHGEF1-220ENST00000600274 ASGR2P07307 311 aa10.92□□□□□ -0.66
ARHGEF1-220ENST00000600274 ANXA8P13928 327 aa10.92□□□□□ -0.66
ARHGEF1-220ENST00000600274 ITIH1P19827 911 aa10.92□□□□□ -0.66
ARHGEF1-220ENST00000600274 GADD45AP24522 165 aa10.92□□□□□ -0.66
ARHGEF1-220ENST00000600274 CD6P30203 668 aa10.92□□□□□ -0.66
ARHGEF1-220ENST00000600274 CDC42P60953 191 aa10.92□□□□□ -0.66
ARHGEF1-220ENST00000600274 PRDX1Q06830 199 aaKnown RBP10.92□□□□□ -0.66
ARHGEF1-220ENST00000600274 IL18R1Q13478 541 aa10.92□□□□□ -0.66
ARHGEF1-220ENST00000600274 PUM1Q14671 1186 aaKnown RBP eCLIP10.92□□□□□ -0.662e-7■■■■□ 22.1
ARHGEF1-220ENST00000600274 DGUOKQ16854 277 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms