RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PRKAR1AP10644 381 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 DRD4P21917 467 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 PPP2R1BP30154 601 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 CLDN8P56748 225 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 C21orf58P58505 322 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 ATP1A4Q13733 1029 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 PCOLCEQ15113 449 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 TICAM1Q8IUC6 712 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 OR11G2Q8NGC1 345 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 OR4K14Q8NGD5 310 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 METTL21AQ8WXB1 218 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 GFM2Q969S9 779 aaKnown RBP17.63■□□□□ 0.41
CCDC9-205ENST00000600117 ZNF764Q96H86 408 aaPredicted RBP17.63■□□□□ 0.41
CCDC9-205ENST00000600117 ZNF681Q96N22 645 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 WDR77Q9BQA1 342 aaPredicted RBP17.63■□□□□ 0.41
CCDC9-205ENST00000600117 ALOXE3Q9BYJ1 711 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 REEP4Q9H6H4 257 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 P4HTMQ9NXG6 502 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 GPR45Q9Y5Y3 372 aa17.63■□□□□ 0.41
CCDC9-205ENST00000600117 IGHV3-20A0A0C4DH32 117 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 A0A0G2JND7 137 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 GMNCA6NCL1 334 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 COX6A1P12074 109 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 OR4D2P58180 307 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 EEF1A2Q05639 463 aaKnown RBP17.62■□□□□ 0.41
CCDC9-205ENST00000600117 STX4Q12846 297 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 SERTAD2Q14140 314 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 ZNF750Q32MQ0 723 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 ZNF385BQ569K4 471 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 SFT2D3Q587I9 215 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 CPZQ66K79 652 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 CPEB2Q7Z5Q1 589 aaKnown RBP17.62■□□□□ 0.41
CCDC9-205ENST00000600117 RIMKLAQ8IXN7 391 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 KRTCAP2Q8N6L1 136 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 NUDT8Q8WV74 236 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 MARK4Q96L34 752 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 CATSPER2Q96P56 530 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 IP6K3Q96PC2 410 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 TMEM120AQ9BXJ8 343 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 BRINP2Q9C0B6 783 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 ZNF700Q9H0M5 742 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 TAS2R7Q9NYW3 318 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 KLHL14Q9P2G3 628 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 C19orf25Q9UFG5 118 aaPredicted RBP17.62■□□□□ 0.41
CCDC9-205ENST00000600117 ATP6V1HQ9UI12 483 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 UTS2RQ9UKP6 389 aa17.62■□□□□ 0.41
CCDC9-205ENST00000600117 IGHV1-45A0A0A0MS14 117 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 ENO4A6NNW6 628 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 E9PBE3 544 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 SCAMP2O15127 329 aaKnown RBP17.61■□□□□ 0.41
CCDC9-205ENST00000600117 UBDO15205 165 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 KLHL41O60662 606 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 PIK3R1P27986 724 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 DUSP2Q05923 314 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 ACTN3Q08043 901 aaPredicted RBP17.61■□□□□ 0.41
CCDC9-205ENST00000600117 SF3A3Q12874 501 aaKnown RBP eCLIP17.61■□□□□ 0.41
CCDC9-205ENST00000600117 ANKRD26P1Q6NSI1 321 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 FAM180BQ6P0A1 224 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 C9orf43Q8TAL5 461 aaPredicted RBP17.61■□□□□ 0.41
CCDC9-205ENST00000600117 C10orf82Q8WW14 230 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 THAP4Q8WY91 577 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 EXOSC8Q96B26 276 aaKnown RBP17.61■□□□□ 0.41
CCDC9-205ENST00000600117 KLHL29Q96CT2 875 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 MTERF3Q96E29 417 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 CNRIP1Q96F85 164 aaPredicted RBP17.61■□□□□ 0.41
CCDC9-205ENST00000600117 MIEF1Q9NQG6 463 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 SLC35C2Q9NQQ7 365 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 FBXL4Q9UKA2 621 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 PSME2Q9UL46 239 aa17.61■□□□□ 0.41
CCDC9-205ENST00000600117 G3BP2Q9UN86 482 aaKnown RBP17.61■□□□□ 0.41
CCDC9-205ENST00000600117 CROCCQ5TZA2 2017 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 SYNDIG1LA6NDD5 238 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 GABRR3A8MPY1 467 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 ERAL1O75616 437 aaKnown RBP17.6■□□□□ 0.41
CCDC9-205ENST00000600117 SLC35E2P0CK97 266 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 CPMP14384 443 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 IDO1P14902 403 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 PRPS1L1P21108 318 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 HPCAL1P37235 193 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 STT3AP46977 705 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 MRPL19P49406 292 aaKnown RBP17.6■□□□□ 0.41
CCDC9-205ENST00000600117 XKP51811 444 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 ARFIP2P53365 341 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 BIKQ13323 160 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 CEBPEQ15744 281 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 GSTA3Q16772 222 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 MPEG1Q2M385 716 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 PDCD4Q53EL6 469 aaKnown RBP17.6■□□□□ 0.41
CCDC9-205ENST00000600117 AMER2Q8N7J2 671 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 C7orf57Q8NEG2 295 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 TEX37Q96LM6 180 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 IMMP1LQ96LU5 166 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 ADAP2Q9NPF8 381 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 PNO1Q9NRX1 252 aaKnown RBP17.6■□□□□ 0.41
CCDC9-205ENST00000600117 ADAM21Q9UKJ8 722 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 POLHQ9Y253 713 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 DOPEY1Q5JWR5 2465 aa17.6■□□□□ 0.41
CCDC9-205ENST00000600117 A8MUA0 341 aa17.59■□□□□ 0.41
CCDC9-205ENST00000600117 MASP2O00187 686 aa17.59■□□□□ 0.41
CCDC9-205ENST00000600117 PEX12O00623 359 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms