RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 Q6ZPB1 254 aaPredicted RBP12.09□□□□□ -0.47
USE1-207ENST00000596136 C9orf40Q8IXQ3 194 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 RIBC1Q8N443 379 aaPredicted RBP12.09□□□□□ -0.47
USE1-207ENST00000596136 CPSF7Q8N684 471 aaKnown RBP12.09□□□□□ -0.47
USE1-207ENST00000596136 SLC15A4Q8N697 577 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 OR4K14Q8NGD5 310 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 ASB15Q8WXK1 588 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 RIT1Q92963 219 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 CAVIN3Q969G5 261 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 SGCZQ96LD1 299 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 CXorf21Q9HAI6 301 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 TIMMDC1Q9NPL8 285 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.09□□□□□ -0.47
USE1-207ENST00000596136 OXSMQ9NWU1 459 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 HPF1Q9NWY4 346 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 SIRT5Q9NXA8 310 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 LGALS13Q9UHV8 139 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 PCDHA9Q9Y5H5 950 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 CROCCQ5TZA2 2017 aa12.09□□□□□ -0.47
USE1-207ENST00000596136 A0A1W2PS29 197 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 ARHGAP10A1A4S6 786 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 CCDC151A5D8V7 595 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 OR6C76A6NM76 312 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 COPEO14579 308 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 OR10H2O60403 315 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 NADKO95544 446 aaPredicted RBP12.08□□□□□ -0.48
USE1-207ENST00000596136 CHN1P15882 459 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 PIK3R1P27986 724 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 HMOX2P30519 316 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 MEOX1P50221 254 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 HTR6P50406 440 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 XKP51811 444 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 NAGLUP54802 743 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 PER3P56645 1201 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 ERVK-8P63133 956 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 FUT7Q11130 342 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 ZNF267Q14586 743 aaPredicted RBP12.08□□□□□ -0.48
USE1-207ENST00000596136 GALNT18Q6P9A2 607 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 OPN5Q6U736 354 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 LYPD8Q6UX82 237 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 IL20RBQ6UXL0 311 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 FRMD7Q6ZUT3 714 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 CHERPQ8IWX8 916 aaKnown RBP12.08□□□□□ -0.48
USE1-207ENST00000596136 C1orf52Q8N6N3 182 aaKnown RBP12.08□□□□□ -0.48
USE1-207ENST00000596136 GOLM1Q8NBJ4 401 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 PSD4Q8NDX1 1056 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 HBEGFQ99075 208 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 ACPTQ9BZG2 426 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 ROPN1BQ9BZX4 212 aaPredicted RBP12.08□□□□□ -0.48
USE1-207ENST00000596136 ROPN1Q9HAT0 212 aaPredicted RBP12.08□□□□□ -0.48
USE1-207ENST00000596136 SH2D2AQ9NP31 389 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 DEPPQ9NTK1 212 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 PLEKHB1Q9UF11 243 aaPredicted RBP12.08□□□□□ -0.48
USE1-207ENST00000596136 MCM8Q9UJA3 840 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 ERVK-19Q9WJR5 959 aa12.08□□□□□ -0.48
USE1-207ENST00000596136 UNC79Q9P2D8 2635 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 SMIM23A6NLE4 172 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 CYSRT1A8MQ03 144 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 NPIPA5E9PKD4 350 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 CPMP14384 443 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 CPA3P15088 417 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 PORP16435 677 aaPredicted RBP12.07□□□□□ -0.48
USE1-207ENST00000596136 ZNF24P17028 368 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 S1PR1P21453 382 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 CA7P43166 264 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 FOXA1P55317 472 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 RAE1P78406 368 aaKnown RBP12.07□□□□□ -0.48
USE1-207ENST00000596136 RBPJQ06330 500 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 ASPHQ12797 758 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 EBPQ15125 230 aaKnown RBP12.07□□□□□ -0.48
USE1-207ENST00000596136 ZNF791Q3KP31 576 aaPredicted RBP12.07□□□□□ -0.48
USE1-207ENST00000596136 SPIN4Q56A73 249 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 RNF111Q6ZNA4 994 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 RTL4Q6ZR62 310 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 TRABD2AQ86V40 505 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 C4orf33Q8N1A6 199 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 MREGQ8N565 214 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 CCNYL1Q8N7R7 359 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 ZNF615Q8N8J6 731 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 ZNF441Q8N8Z8 693 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 BANPQ8N9N5 519 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 OR2W6PQ8NHA6 318 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 TP53INP1Q96A56 240 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 ZNF681Q96N22 645 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 KCNA7Q96RP8 456 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 TMEM109Q9BVC6 243 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 WWTR1Q9GZV5 400 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 C12orf65Q9H3J6 166 aaKnown RBP12.07□□□□□ -0.48
USE1-207ENST00000596136 MID1IP1Q9NPA3 183 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 NPIPA1Q9UND3 350 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 ERVK-11Q9UQG0 969 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 PLLPQ9Y342 182 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 TIMM22Q9Y584 194 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 DNAJC13O75165 2243 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 ZNF407Q9C0G0 2248 aa12.07□□□□□ -0.48
USE1-207ENST00000596136 CENPEQ02224 2701 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 SLC19A2O60779 497 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 CLDN1O95832 211 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 ATP1B1P05026 303 aa12.06□□□□□ -0.48
USE1-207ENST00000596136 CT62P0C5K7 136 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms