RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 LILRA3Q8N6C8 439 aaPredicted RBP12.05□□□□□ -0.48
SCAF1-202ENST00000595242 FNDC5Q8NAU1 212 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 OR56A3Q8NH54 315 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 SPATA3Q8NHX4 192 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 SUN3Q8TAQ9 357 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 THAP3Q8WTV1 239 aaPredicted RBP12.05□□□□□ -0.48
SCAF1-202ENST00000595242 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.05□□□□□ -0.48
SCAF1-202ENST00000595242 CCDC124Q96CT7 223 aaKnown RBP12.05□□□□□ -0.48
SCAF1-202ENST00000595242 SPDL1Q96EA4 605 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 XKR8Q9H6D3 395 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 CTSFQ9UBX1 484 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 RNF11Q9Y3C5 154 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 LRRC42Q9Y546 428 aa12.05□□□□□ -0.48
SCAF1-202ENST00000595242 A0A1B0GX78 115 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 ASPDHA6ND91 283 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 KIAA1324LA8MWY0 1029 aaPredicted RBP12.04□□□□□ -0.48
SCAF1-202ENST00000595242 E7ENX8 843 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 H3BNX3 289 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 ANGPT2O15123 496 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 ULK1O75385 1050 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 SLC22A3O75751 556 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 RSL1D1O76021 490 aaKnown RBP12.04□□□□□ -0.48
SCAF1-202ENST00000595242 ARL1P40616 181 aaPredicted RBP12.04□□□□□ -0.48
SCAF1-202ENST00000595242 GCGRP47871 477 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 POLR2JP52435 117 aaKnown RBP12.04□□□□□ -0.48
SCAF1-202ENST00000595242 ARSFP54793 590 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 RPA4Q13156 261 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 FLOT2Q14254 428 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 CEBPEQ15744 281 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 AP5B1Q2VPB7 878 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 KRTCAP3Q53RY4 240 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 SAMD4BQ5PRF9 694 aaKnown RBP12.04□□□□□ -0.48
SCAF1-202ENST00000595242 LIPJQ5W064 366 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 ZFP1Q6P2D0 407 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 CYP20A1Q6UW02 462 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 SCIMPQ6UWF3 145 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 BIVMQ86UB2 503 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 DPP10Q8N608 796 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 SNX31Q8N9S9 440 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 PHC3Q8NDX5 983 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 PHF10Q8WUB8 498 aaKnown RBP12.04□□□□□ -0.48
SCAF1-202ENST00000595242 NRG4Q8WWG1 115 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 C8orf44Q96CB5 159 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 DUS3LQ96G46 650 aaKnown RBP12.04□□□□□ -0.48
SCAF1-202ENST00000595242 FCRL1Q96LA6 429 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 FOPNLQ96NB1 174 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 OR2A14Q96R47 310 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 ACTR8Q9H981 624 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 GID8Q9NWU2 228 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 GPRC5BQ9NZH0 403 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 STOX2Q9P2F5 926 aaPredicted RBP12.04□□□□□ -0.48
SCAF1-202ENST00000595242 LEF1Q9UJU2 399 aaPredicted RBP12.04□□□□□ -0.48
SCAF1-202ENST00000595242 NXT1Q9UKK6 140 aaKnown RBP12.04□□□□□ -0.48
SCAF1-202ENST00000595242 SNX6Q9UNH7 406 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 PLCL2Q9UPR0 1127 aa12.04□□□□□ -0.48
SCAF1-202ENST00000595242 FAM227AF5H4B4 570 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 CASQ2O14958 399 aaPredicted RBP12.03□□□□□ -0.48
SCAF1-202ENST00000595242 CFLARO15519 480 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 PRAMEF4O60810 478 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 C1orf105O95561 183 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 HSD17B1P14061 328 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 UGT2B7P16662 529 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 IMPA1P29218 277 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 IL12AP29459 219 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 CASP2P42575 452 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 PNLIPRP1P54315 467 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 UFM1P61960 85 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 ADAM8P78325 824 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 MS4A2Q01362 244 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 PRKG2Q13237 762 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 TRIM25Q14258 630 aaKnown RBP12.03□□□□□ -0.48
SCAF1-202ENST00000595242 KIAA0040Q15053 153 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 PRAMEF9Q5VWM5 478 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 ICE2Q659A1 982 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 AGTRAPQ6RW13 159 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 UNC5DQ6UXZ4 953 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 DHDDSQ86SQ9 333 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 PRIMA1Q86XR5 153 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 FAM9CQ8IZT9 166 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 DNAJC22Q8N4W6 341 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 GLB1L3Q8NCI6 653 aaPredicted RBP12.03□□□□□ -0.48
SCAF1-202ENST00000595242 SKA2Q8WVK7 121 aaPredicted RBP12.03□□□□□ -0.48
SCAF1-202ENST00000595242 METTL2AQ96IZ6 378 aaKnown RBP12.03□□□□□ -0.48
SCAF1-202ENST00000595242 TEX37Q96LM6 180 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 GPR137Q96N19 417 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 SMR3AQ99954 134 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 CRB3Q9BUF7 120 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 C1orf50Q9BV19 199 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 LRTM1Q9HBL6 345 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 NPDC1Q9NQX5 325 aaPredicted RBP12.03□□□□□ -0.48
SCAF1-202ENST00000595242 COQ3Q9NZJ6 369 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 ZNF490Q9ULM2 529 aaPredicted RBP12.03□□□□□ -0.48
SCAF1-202ENST00000595242 DNAJC13O75165 2243 aa12.03□□□□□ -0.48
SCAF1-202ENST00000595242 HRNRQ86YZ3 2850 aaPredicted RBP12.03□□□□□ -0.48
SCAF1-202ENST00000595242 C15orf38-AP3S2A0A0A6YYH1 394 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 NSG1A0A0A6YYJ2 146 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 OR5H15A6NDH6 313 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 PRORSD1PA6NEY8 169 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 CCDC154A6NI56 674 aa12.02□□□□□ -0.49
SCAF1-202ENST00000595242 VSTM2BA6NLU5 285 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms