RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 PSPHP78330 225 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 ILKQ13418 452 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 Q5BKY6 102 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 FAM129CQ86XR2 697 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 KRT78Q8N1N4 520 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 IQCF1Q8N6M8 205 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 TCEANCQ8N8B7 351 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 EXOSC8Q96B26 276 aaKnown RBP15.64■□□□□ 0.09
LIG1-206ENST00000594067 TM4SF18Q96CE8 201 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 TMEM80Q96HE8 168 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 WDFY2Q96P53 400 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 A4GALTQ9NPC4 353 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 FZD3Q9NPG1 666 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 SNTG1Q9NSN8 517 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 CCDC88CQ9P219 2028 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 NINQ8N4C6 2090 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 NOTOA8MTQ0 251 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 ANHXE9PGG2 379 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 MMP20O60882 483 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 H1F0P07305 194 aaKnown RBP15.64■□□□□ 0.09
LIG1-206ENST00000594067 TRAPPC2P0DI81 140 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 TRAPPC2BP0DI82 140 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 ENDOUP21128 410 aaKnown RBP15.64■□□□□ 0.09
LIG1-206ENST00000594067 RPS5P46782 204 aaKnown RBP15.64■□□□□ 0.09
LIG1-206ENST00000594067 SNRPGP62308 76 aaKnown RBP15.64■□□□□ 0.09
LIG1-206ENST00000594067 CHRNEQ04844 493 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 SPHARQ15513 63 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 CASP12Q6UXS9 341 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 OR7G1Q8NGA0 311 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 SETD7Q8WTS6 366 aaKnown RBP15.64■□□□□ 0.09
LIG1-206ENST00000594067 OR5P2Q8WZ92 322 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 LRIG1Q96JA1 1093 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 SLC6A18Q96N87 628 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 ZNF717Q9BY31 904 aaPredicted RBP15.64■□□□□ 0.09
LIG1-206ENST00000594067 SEMA3GQ9NS98 782 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 AHSPQ9NZD4 102 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 TAC3Q9UHF0 121 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 MGAT4BQ9UQ53 548 aa15.64■□□□□ 0.09
LIG1-206ENST00000594067 ABHD14A-ACY1A0A1B0GW23 586 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 FEZF1A0PJY2 475 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 GNRH1P01148 92 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 RHOP08100 348 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 TNNI3P19429 210 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 ZNF91Q05481 1191 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 HYAL2Q12891 473 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 TARDBPQ13148 414 aaKnown RBP eCLIP15.63■□□□□ 0.091e-7■■■■□ 25.2
LIG1-206ENST00000594067 TAB1Q15750 504 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 ARHGAP15Q53QZ3 475 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 SNAP47Q5SQN1 464 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 GDPGP1Q6ZNW5 385 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 OLIG3Q7RTU3 272 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 SZRD1Q7Z422 152 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 ANKRD53Q8N9V6 530 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 SLC7A6Q92536 515 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 UCN3Q969E3 161 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 TSSK6Q9BXA6 273 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 POLR2J3Q9H1A7 115 aaKnown RBP15.63■□□□□ 0.09
LIG1-206ENST00000594067 TMEM39AQ9NV64 488 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 CUEDC1Q9NWM3 386 aaPredicted RBP15.63■□□□□ 0.09
LIG1-206ENST00000594067 SAGE1Q9NXZ1 904 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 MAU2Q9Y6X3 613 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 HIDE1A8MVS5 230 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 HMGN4O00479 90 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 LZTS3O60299 673 aaPredicted RBP15.63■□□□□ 0.09
LIG1-206ENST00000594067 TPST2O60704 377 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 PAPLNO95428 1278 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 HBQ1P09105 142 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 MESP2Q0VG99 397 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 UAP1L1Q3KQV9 507 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 KHDRBS2Q5VWX1 349 aaKnown RBP15.63■□□□□ 0.09
LIG1-206ENST00000594067 PGBD2Q6P3X8 592 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 HMGN2P46Q86SG4 172 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 ARRDC3Q96B67 414 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 FYTTD1Q96QD9 318 aaKnown RBP15.63■□□□□ 0.09
LIG1-206ENST00000594067 POLR2J2Q9GZM3 115 aaKnown RBP15.63■□□□□ 0.09
LIG1-206ENST00000594067 MVB12BQ9H7P6 319 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 RANGRFQ9HD47 186 aaPredicted RBP15.63■□□□□ 0.09
LIG1-206ENST00000594067 TVP23BQ9NYZ1 205 aa15.63■□□□□ 0.09
LIG1-206ENST00000594067 ZNF670-ZNF695F2Z2N8 137 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 TNFRSF10AO00220 468 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 FAAHO00519 579 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 SLC28A2O43868 658 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 CYP17A1P05093 508 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 C6P13671 934 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 PSMA1P25786 263 aaKnown RBP15.62■□□□□ 0.09
LIG1-206ENST00000594067 BSGP35613 385 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 ST8SIA6P61647 398 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 PIN1Q13526 163 aaPredicted RBP15.62■□□□□ 0.09
LIG1-206ENST00000594067 TCEAL5Q5H9L2 206 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 C12orf73Q69YU5 71 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 LCTLQ6UWM7 567 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 ZNF438Q7Z4V0 828 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 C12orf40Q86WS4 652 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 GPR65Q8IYL9 337 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 RAD51AP1Q96B01 352 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 SIRT3Q9NTG7 399 aaPredicted RBP15.62■□□□□ 0.09
LIG1-206ENST00000594067 SEC14L4Q9UDX3 406 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 NUFIP1Q9UHK0 495 aaKnown RBP15.62■□□□□ 0.09
LIG1-206ENST00000594067 TBX21Q9UL17 535 aa15.62■□□□□ 0.09
LIG1-206ENST00000594067 KLHL20Q9Y2M5 609 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms