RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 DEFA6Q01524 100 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 POU4F1Q01851 419 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 CHIT1Q13231 466 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 DDX39BQ13838 428 aaKnown RBP6.8□□□□□ -1.32
VAT1-209ENST00000592388 BMPR2Q13873 1038 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 SLMAPQ14BN4 828 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 TRADDQ15628 312 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 ELAVL1Q15717 326 aaKnown RBP6.8□□□□□ -1.32
VAT1-209ENST00000592388 ZKSCAN8Q15776 578 aaPredicted RBP6.8□□□□□ -1.32
VAT1-209ENST00000592388 HSPB2Q16082 182 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 ZNF750Q32MQ0 723 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 FBXL19-AS1Q494R0 122 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 UBAP2Q5T6F2 1119 aaKnown RBP6.8□□□□□ -1.32
VAT1-209ENST00000592388 FAM219BQ5XKK7 198 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 C12orf54Q6X4T0 127 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 DGAT2L6Q6ZPD8 337 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 CTAGE3PQ8IX95 158 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 OR4N5Q8IXE1 308 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 ZNF595Q8IYB9 648 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 KRT78Q8N1N4 520 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 C17orf53Q8N3J3 647 aaPredicted RBP6.8□□□□□ -1.32
VAT1-209ENST00000592388 TCAIMQ8N3R3 496 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 NAXEQ8NCW5 288 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 TTLQ8NG68 377 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 SLC2A12Q8TD20 617 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 ZNF473Q8WTR7 871 aaKnown RBP6.8□□□□□ -1.32
VAT1-209ENST00000592388 PYROXD1Q8WU10 500 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 PTPMT1Q8WUK0 201 aaPredicted RBP6.8□□□□□ -1.32
VAT1-209ENST00000592388 ASB15Q8WXK1 588 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 SMPDL3BQ92485 455 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 WDR34Q96EX3 536 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 SCYL1Q96KG9 808 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 RUNDC3BQ96NL0 473 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 CPNE1Q99829 537 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 CCDC77Q9BR77 488 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 BEX2Q9BXY8 128 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 TTTY12Q9BZ98 90 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 NT5DC2Q9H857 520 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 CLK4Q9HAZ1 481 aaKnown RBP6.8□□□□□ -1.32
VAT1-209ENST00000592388 PRM3Q9NNZ6 103 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 TIMMDC1Q9NPL8 285 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 NSMCE4AQ9NXX6 385 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 GPRC5BQ9NZH0 403 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 MYOTQ9UBF9 498 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 PTBP2Q9UKA9 531 aaKnown RBP6.8□□□□□ -1.32
VAT1-209ENST00000592388 ACAD8Q9UKU7 415 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 RNF112Q9ULX5 631 aa6.8□□□□□ -1.32
VAT1-209ENST00000592388 EIF3LQ9Y262 564 aaKnown RBP6.8□□□□□ -1.32
VAT1-209ENST00000592388 HEATR5AQ86XA9 2040 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 A0A088AWK7 358 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 LRRC14BA6NHZ5 514 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 FAM159BA6NKW6 160 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 CASKO14936 926 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 WDR1O75083 606 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 SOX30O94993 753 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 LRATO95237 230 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 TGFB1P01137 390 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 S100BP04271 92 aaPredicted RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 SLC35E2BP0CK96 405 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 CCL3P10147 92 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 STMN1P16949 149 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 ZNF10P21506 573 aaPredicted RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 HIST1H1TP22492 207 aaPredicted RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 ATP5A1P25705 553 aaKnown RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 GSTM2P28161 218 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 SOX18P35713 384 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 GGT5P36269 586 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 GP5P40197 560 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 PAFAH1B1P43034 410 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 SSR2P43308 183 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 MAGEA5P43359 124 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 HNRNPH2P55795 449 aaKnown RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 RAB10P61026 200 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 ATP6V0D1P61421 351 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 PPIAP62937 165 aaKnown RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 PLGLB1Q02325 96 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 IRF8Q02556 426 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 STX4Q12846 297 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 VEZF1Q14119 521 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 KBTBD12Q3ZCT8 623 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 WIPI1Q5MNZ9 446 aaPredicted RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 SULT1C3Q6IMI6 304 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 HSDL2Q6YN16 418 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 LRRC70Q7Z2Q7 622 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 CCDC25Q86WR0 208 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 C9orf40Q8IXQ3 194 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 MEIOBQ8N635 442 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 TMEM251Q8N6I4 163 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 ACOT4Q8N9L9 421 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 OR14A16Q8NHC5 309 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 ZNF721Q8TF20 911 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 CDKL2Q92772 493 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 ANKRD9Q96BM1 317 aaPredicted RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 PTCD3Q96EY7 689 aaKnown RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 ZBED6CLQ96FA7 236 aaPredicted RBP6.79□□□□□ -1.32
VAT1-209ENST00000592388 TSPAN17Q96FV3 270 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 UBXN10Q96LJ8 280 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 DACH2Q96NX9 599 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 KCNC2Q96PR1 638 aa6.79□□□□□ -1.32
VAT1-209ENST00000592388 ATOH8Q96SQ7 321 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms