RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ERAL1O75616 437 aaKnown RBP11.2□□□□□ -0.62
TPM4-212ENST00000590180 NT5EP21589 574 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 SERPINB3P29508 390 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 RFC3P40938 356 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 ALDH9A1P49189 494 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 HTR6P50406 440 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 DNAJB13P59910 316 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 GPR85P60893 370 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 NAA20P61599 178 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 HMGCS1Q01581 520 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 SLC18A2Q05940 514 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 GALNT1Q10472 559 aaPredicted RBP11.2□□□□□ -0.62
TPM4-212ENST00000590180 CSTF3Q12996 717 aaKnown RBP11.2□□□□□ -0.62
TPM4-212ENST00000590180 C4orf17Q53FE4 359 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 PIGGQ5H8A4 983 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 SPDYAQ5MJ70 313 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 C6orf163Q5TEZ5 329 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 C1QL3Q5VWW1 255 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 WDR93Q6P2C0 686 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 OPN5Q6U736 354 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 RNF111Q6ZNA4 994 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 SLC29A4Q7RTT9 530 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 FJX1Q86VR8 437 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 GPALPP1Q8IXQ4 340 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 GBP7Q8N8V2 638 aaPredicted RBP11.2□□□□□ -0.62
TPM4-212ENST00000590180 RDH11Q8TC12 318 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 AENQ8WTP8 325 aaKnown RBP11.2□□□□□ -0.62
TPM4-212ENST00000590180 FBXL20Q96IG2 436 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 FRMD6Q96NE9 622 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 GAL3ST4Q96RP7 486 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 FAIM2Q9BWQ8 316 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 PARD6BQ9BYG5 372 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 SHCBP1LQ9BZQ2 653 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 ROPN1BQ9BZX4 212 aaPredicted RBP11.2□□□□□ -0.62
TPM4-212ENST00000590180 ROPN1Q9HAT0 212 aaPredicted RBP11.2□□□□□ -0.62
TPM4-212ENST00000590180 OXSMQ9NWU1 459 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 MID2Q9UJV3 735 aa11.2□□□□□ -0.62
TPM4-212ENST00000590180 GNG14A0A1W2PPG7 69 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 A0A1W2PS29 197 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 A1L4Q6 167 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 UBFD1O14562 309 aaKnown RBP11.19□□□□□ -0.62
TPM4-212ENST00000590180 SPAG7O75391 227 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 LDLRP01130 860 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 IGKV3-11P04433 115 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 STSP08842 583 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 NUDT17P0C025 328 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 RNF224P0DH78 156 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 GP1BBP13224 206 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 CPMP14384 443 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 PORP16435 677 aaPredicted RBP11.19□□□□□ -0.62
TPM4-212ENST00000590180 ZNF24P17028 368 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 GALNSP34059 522 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 FEN1P39748 380 aaKnown RBP11.19□□□□□ -0.62
TPM4-212ENST00000590180 CASP6P55212 293 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 FOXA1P55317 472 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 PER3P56645 1201 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 TRA2BP62995 288 aaKnown RBP11.19□□□□□ -0.62
TPM4-212ENST00000590180 ACSM2AQ08AH3 577 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 IMPG1Q17R60 797 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 MPEG1Q2M385 716 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 LIPMQ5VYY2 423 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 HLA-DQA1Q5Y7H0 255 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 ACSM2BQ68CK6 577 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 RTL4Q6ZR62 310 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 C10orf107Q8IVU9 208 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 C9orf40Q8IXQ3 194 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 SRRM1Q8IYB3 904 aaKnown RBP11.19□□□□□ -0.62
TPM4-212ENST00000590180 MMP21Q8N119 569 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 RIBC1Q8N443 379 aaPredicted RBP11.19□□□□□ -0.62
TPM4-212ENST00000590180 POGLUT1Q8NBL1 392 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 PSD4Q8NDX1 1056 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 NUBPLQ8TB37 319 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 SLC22A8Q8TCC7 542 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 AGAP11Q8TF27 550 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 APIPQ96GX9 242 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 SGCZQ96LD1 299 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 GPR137Q96N19 417 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 ACPTQ9BZG2 426 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 CXorf21Q9HAI6 301 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 PFDN4Q9NQP4 134 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 MCM8Q9UJA3 840 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 SH3BGRL2Q9UJC5 107 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 PLLPQ9Y342 182 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 ZNF780BQ9Y6R6 833 aa11.19□□□□□ -0.62
TPM4-212ENST00000590180 GOLGA6L10A6NI86 522 aa11.18□□□□□ -0.62
TPM4-212ENST00000590180 G3V3Y1 287 aa11.18□□□□□ -0.62
TPM4-212ENST00000590180 H3BQF6 201 aa11.18□□□□□ -0.62
TPM4-212ENST00000590180 CCL21O00585 134 aa11.18□□□□□ -0.62
TPM4-212ENST00000590180 TFECO14948 347 aaPredicted RBP11.18□□□□□ -0.62
TPM4-212ENST00000590180 PCDH7O60245 1069 aa11.18□□□□□ -0.62
TPM4-212ENST00000590180 ZNF354AO60765 605 aaPredicted RBP11.18□□□□□ -0.62
TPM4-212ENST00000590180 TRIM13O60858 407 aa11.18□□□□□ -0.62
TPM4-212ENST00000590180 P04436 131 aa11.18□□□□□ -0.62
TPM4-212ENST00000590180 CSNK2A2P19784 350 aaPredicted RBP11.18□□□□□ -0.62
TPM4-212ENST00000590180 CNR1P21554 472 aa11.18□□□□□ -0.62
TPM4-212ENST00000590180 SSTR4P31391 388 aa11.18□□□□□ -0.62
TPM4-212ENST00000590180 SLC37A1P57057 533 aa11.18□□□□□ -0.62
TPM4-212ENST00000590180 PLGLB1Q02325 96 aa11.18□□□□□ -0.62
TPM4-212ENST00000590180 SPRED3Q2MJR0 410 aa11.18□□□□□ -0.62
TPM4-212ENST00000590180 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms