RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 GPC6Q9Y625 555 aaPredicted RBP18.14■□□□□ 0.49
PRKCSH-209ENST00000589838 CHD7Q9P2D1 2997 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 EFCAB10A6NFE3 127 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 FFAR1O14842 300 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 LINC01565O15544 149 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 LCKP06239 509 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 ATP5A1P25705 553 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 CRISP3P54108 245 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 KIAA1024LP59773 190 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 STXBP1P61764 594 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 SFSWAPQ12872 951 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 MAPK11Q15759 364 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 TMEM196Q5HYL7 178 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 MRM1Q6IN84 353 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 SZRD1Q7Z422 152 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 ACOT4Q8N9L9 421 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 TMEM145Q8NBT3 493 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 TREX2Q9BQ50 279 aaPredicted RBP18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 ANKHQ9HCJ1 492 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 GIMAP4Q9NUV9 329 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 OR6C2Q9NZP2 312 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 FTSJ1Q9UET6 329 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 MSRAQ9UJ68 235 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 ASB4Q9Y574 426 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 SNX11Q9Y5W9 270 aa18.13■□□□□ 0.49
PRKCSH-209ENST00000589838 SLC31A1O15431 190 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 OSMP13725 252 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 MAT2AP31153 395 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 SLC19A1P41440 591 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 HYAL1Q12794 435 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 HYAL2Q12891 473 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 NR1D2Q14995 579 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 ANKDD1AQ495B1 522 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 TCTN3Q6NUS6 607 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 PTCHD4Q6ZW05 846 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 MTSS1LQ765P7 747 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 LINC00471Q8N535 108 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 FAM46DQ8NEK8 389 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 OR56A1Q8NGH5 318 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 LGALS12Q96DT0 336 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 RPP25Q9BUL9 199 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 SERHL2Q9H4I8 314 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 BCL2L10Q9HD36 194 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 CNOT2Q9NZN8 540 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 PCDHGA4Q9Y5G9 962 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 TRBV4-1A0A0J9YWV2 114 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 PRSS38A1L453 326 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 NADKO95544 446 aaPredicted RBP18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 CHMP24386 653 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 TGFBR2P37173 567 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 UGT2B15P54855 530 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 MLLT10P55197 1068 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 VBP1P61758 197 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 TUBA1BP68363 451 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 OLR1P78380 273 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 ILKQ13418 452 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 SYPL1Q16563 259 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 TIGD6Q17RP2 521 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 PRAMEF8Q5VWM4 474 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 PRAMEF7Q5VXH5 474 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 WASH2PQ6VEQ5 465 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 DEF8Q6ZN54 512 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 TUBA1AQ71U36 451 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 DRAXINQ8NBI3 349 aaPredicted RBP18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 OR8K5Q8NH50 307 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 NDNFQ8TB73 568 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 DYNC2LI1Q8TCX1 351 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 UCN3Q969E3 161 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 ABTB1Q969K4 478 aaPredicted RBP18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 FAIMQ9NVQ4 179 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 LYARQ9NX58 379 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 ACAD8Q9UKU7 415 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 SLC9A8Q9Y2E8 581 aa18.12■□□□□ 0.49
PRKCSH-209ENST00000589838 DSPPQ9NZW4 1301 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 A0A1W2PR48 441 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 EFCAB9A8MZ26 197 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 ISM1B1AKI9 464 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 PPM1DO15297 605 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 CNOT3O75175 753 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 ERAL1O75616 437 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 HOXB2P14652 356 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 CSNK2A2P19784 350 aaPredicted RBP18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 ELAVL4P26378 380 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 C21orf33P30042 268 aaPredicted RBP18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 UGT2B10P36537 528 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 OPRL1P41146 370 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 CLK1P49759 484 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 LSM3P62310 102 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 TMCO5AQ8N6Q1 288 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 LCN9Q8WX39 176 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 RIPOR3Q96MK2 946 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 Q96MT0 163 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 BTBD2Q9BX70 525 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 FZD3Q9NPG1 666 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 MS4A12Q9NXJ0 267 aa18.11■□□□□ 0.49
PRKCSH-209ENST00000589838 NINQ8N4C6 2090 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 A0A0G2JPF8 293 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 HNRNPCL2B2RXH8 293 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 HNRNPCL3B7ZW38 293 aa18.1■□□□□ 0.49
PRKCSH-209ENST00000589838 OR10H3O60404 316 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms