RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 BBS4Q96RK4 519 aa23.26■■□□□ 1.31
RFX1-205ENST00000589239 PAIP1Q9H074 479 aaKnown RBP23.26■■□□□ 1.31
RFX1-205ENST00000589239 ZNF780BQ9Y6R6 833 aa23.26■■□□□ 1.31
RFX1-205ENST00000589239 MYOCOSA0A1B0GUC4 107 aa23.25■■□□□ 1.31
RFX1-205ENST00000589239 PTGER1P34995 402 aa23.25■■□□□ 1.31
RFX1-205ENST00000589239 XKP51811 444 aa23.25■■□□□ 1.31
RFX1-205ENST00000589239 MANFP55145 182 aaKnown RBP23.25■■□□□ 1.31
RFX1-205ENST00000589239 SH3BGRP55822 239 aaPredicted RBP23.25■■□□□ 1.31
RFX1-205ENST00000589239 BTG2P78543 158 aa23.25■■□□□ 1.31
RFX1-205ENST00000589239 SLC13A2Q13183 592 aa23.25■■□□□ 1.31
RFX1-205ENST00000589239 CNPY1Q3B7I2 92 aa23.25■■□□□ 1.31
RFX1-205ENST00000589239 DEFB107AQ8IZN7 70 aa23.25■■□□□ 1.31
RFX1-205ENST00000589239 OR4A15Q8NGL6 344 aa23.25■■□□□ 1.31
RFX1-205ENST00000589239 ZBED6CLQ96FA7 236 aaPredicted RBP23.25■■□□□ 1.31
RFX1-205ENST00000589239 ASPSCR1Q9BZE9 553 aa23.25■■□□□ 1.31
RFX1-205ENST00000589239 TRIM8Q9BZR9 551 aa23.25■■□□□ 1.31
RFX1-205ENST00000589239 GLIPR2Q9H4G4 154 aa23.25■■□□□ 1.31
RFX1-205ENST00000589239 GID8Q9NWU2 228 aa23.25■■□□□ 1.31
RFX1-205ENST00000589239 VAPAQ9P0L0 249 aa23.25■■□□□ 1.31
RFX1-205ENST00000589239 NUP214P35658 2090 aaPredicted RBP23.25■■□□□ 1.31
RFX1-205ENST00000589239 TEX51A0A1B0GUA7 166 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 BMP10O95393 424 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 PTPN6P29350 595 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 NTSP30990 170 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 NCBP2P52298 156 aaKnown RBP eCLIP23.24■■□□□ 1.31
RFX1-205ENST00000589239 HSPB3Q12988 150 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 LCN10Q6JVE6 187 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 HACD2Q6Y1H2 254 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 ZNF595Q8IYB9 648 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 NATD1Q8N6N6 113 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 SUN3Q8TAQ9 357 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 ANKRD9Q96BM1 317 aaPredicted RBP23.24■■□□□ 1.31
RFX1-205ENST00000589239 AMDHD1Q96NU7 426 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 OR1F2PQ96R84 312 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 LANCL2Q9NS86 450 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 GIMAP4Q9NUV9 329 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 SLC25A37Q9NYZ2 338 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 CROTQ9UKG9 612 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 NEUROG3Q9Y4Z2 214 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 PCDHB14Q9Y5E9 798 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 MYO1GB0I1T2 1018 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 C9orf172C9J069 976 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 GPR75O95800 540 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 CEBPEQ15744 281 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 ZC3H7AQ8IWR0 971 aaKnown RBP23.24■■□□□ 1.31
RFX1-205ENST00000589239 MSRB3Q8IXL7 192 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 ADAMTS14Q8WXS8 1223 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 DDA1Q9BW61 102 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 PRTFDC1Q9NRG1 225 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 DLL3Q9NYJ7 618 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 PCDHGA7Q9Y5G6 932 aa23.24■■□□□ 1.31
RFX1-205ENST00000589239 A0A096LPI6 279 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 CLDN4O14493 209 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 UBTFL6P0CB48 400 aaPredicted RBP23.23■■□□□ 1.31
RFX1-205ENST00000589239 CSNK2A2P19784 350 aaPredicted RBP23.23■■□□□ 1.31
RFX1-205ENST00000589239 FOXL2P58012 376 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 LRIF1Q5T3J3 769 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 MFSD4BQ5TF39 518 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 C8orf82Q6P1X6 216 aaPredicted RBP23.23■■□□□ 1.31
RFX1-205ENST00000589239 C16orf89Q6UX73 402 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 ZNF621Q6ZSS3 439 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 PRSS58Q8IYP2 241 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 ZPBPQ9BS86 351 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 MKKSQ9NPJ1 570 aaPredicted RBP23.23■■□□□ 1.31
RFX1-205ENST00000589239 ACSS1Q9NUB1 689 aaPredicted RBP23.23■■□□□ 1.31
RFX1-205ENST00000589239 TAS2R9Q9NYW1 312 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 ZNF282Q9UDV7 671 aaPredicted RBP23.23■■□□□ 1.31
RFX1-205ENST00000589239 PCDHGB4Q9UN71 923 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 ERN1O75460 977 aaKnown RBP23.23■■□□□ 1.31
RFX1-205ENST00000589239 STK17BO94768 372 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 MAOAP21397 527 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 PSME3P61289 254 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 LRRC74AQ0VAA2 488 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 MINDY4Q4G0A6 757 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 PGAM4Q8N0Y7 254 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 CACTIN-AS1Q8N1I8 211 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 CLEC4FQ8N1N0 589 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 GALNT6Q8NCL4 622 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 CGREF1Q99674 301 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 GPATCH1Q9BRR8 931 aaKnown RBP23.23■■□□□ 1.31
RFX1-205ENST00000589239 COMMD3-BMI1R4GMX3 469 aa23.23■■□□□ 1.31
RFX1-205ENST00000589239 DCDC2BA2VCK2 349 aa23.22■■□□□ 1.31
RFX1-205ENST00000589239 TGFBR3LH3BV60 316 aa23.22■■□□□ 1.31
RFX1-205ENST00000589239 CTNSO60931 367 aa23.22■■□□□ 1.31
RFX1-205ENST00000589239 NPPAP01160 153 aa23.22■■□□□ 1.31
RFX1-205ENST00000589239 HOXB9P17482 250 aaPredicted RBP23.22■■□□□ 1.31
RFX1-205ENST00000589239 MPIP34949 423 aa23.22■■□□□ 1.31
RFX1-205ENST00000589239 PGM1P36871 562 aa23.22■■□□□ 1.31
RFX1-205ENST00000589239 RANBP1P43487 201 aa23.22■■□□□ 1.31
RFX1-205ENST00000589239 TRPC1P48995 793 aa23.22■■□□□ 1.31
RFX1-205ENST00000589239 FAM199XQ6PEV8 388 aaPredicted RBP23.22■■□□□ 1.31
RFX1-205ENST00000589239 LRRC25Q8N386 305 aaPredicted RBP23.22■■□□□ 1.31
RFX1-205ENST00000589239 OR5P2Q8WZ92 322 aa23.22■■□□□ 1.31
RFX1-205ENST00000589239 AURKBQ96GD4 344 aaPredicted RBP23.22■■□□□ 1.31
RFX1-205ENST00000589239 LRFN5Q96NI6 719 aa23.22■■□□□ 1.31
RFX1-205ENST00000589239 IFT80Q9P2H3 777 aaPredicted RBP23.22■■□□□ 1.31
RFX1-205ENST00000589239 PCDHGA3Q9Y5H0 932 aa23.22■■□□□ 1.31
RFX1-205ENST00000589239 CLDN16Q9Y5I7 305 aa23.22■■□□□ 1.31
RFX1-205ENST00000589239 BLACEA4D250 179 aa23.21■■□□□ 1.31
RFX1-205ENST00000589239 C1QCP02747 245 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms