RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 C6orf120Q7Z4R8 191 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 IGFN1Q86VF2 1251 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 YAF2Q8IY57 180 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 AQP11Q8NBQ7 271 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 FAM46DQ8NEK8 389 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 MCFD2Q8NI22 146 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 DYNC2LI1Q8TCX1 351 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF675Q8TD23 568 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 DNASE1L2Q92874 299 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 ZNF837Q96EG3 531 aaPredicted RBP7.02□□□□□ -1.28
ZNF540-206ENST00000589117 SAMD11Q96NU1 681 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 C1QTNF7Q9BXJ2 289 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 PHPT1Q9NRX4 125 aaPredicted RBP7.02□□□□□ -1.28
ZNF540-206ENST00000589117 EHD3Q9NZN3 535 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 SEC14L3Q9UDX4 400 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 DAPK2Q9UIK4 370 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 ACSL6Q9UKU0 697 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 MGAT4BQ9UQ53 548 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 SH2B3Q9UQQ2 575 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 A3GALT2U3KPV4 340 aa7.02□□□□□ -1.28
ZNF540-206ENST00000589117 PNMA8CA0A1B0GUJ8 204 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 MAGEB3O15480 346 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 CLEC3AO75596 197 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 PCCBP05166 539 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 CDH3P22223 829 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 TEAD1P28347 426 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 CD40LGP29965 261 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 NTSP30990 170 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 IFNA8P32881 189 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 SOX6P35712 828 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 CCT3P49368 545 aaKnown RBP7.02□□□□□ -1.29
ZNF540-206ENST00000589117 METAP1P53582 386 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 CRISP1P54107 249 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 ST3GAL4Q11206 333 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 SGCGQ13326 291 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 KRR1Q13601 381 aaKnown RBP7.02□□□□□ -1.29
ZNF540-206ENST00000589117 PTGES3Q15185 160 aaKnown RBP7.02□□□□□ -1.29
ZNF540-206ENST00000589117 MPEG1Q2M385 716 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.02□□□□□ -1.29
ZNF540-206ENST00000589117 FRMPD2BQ6IN97 320 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 FAM83HQ6ZRV2 1179 aaPredicted RBP7.02□□□□□ -1.29
ZNF540-206ENST00000589117 ADCK2Q7Z695 626 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 TRIM69Q86WT6 500 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 CCDC71Q8IV32 467 aaPredicted RBP7.02□□□□□ -1.29
ZNF540-206ENST00000589117 C2orf73Q8N5S3 287 aaPredicted RBP7.02□□□□□ -1.29
ZNF540-206ENST00000589117 SRFBP1Q8NEF9 429 aaKnown RBP7.02□□□□□ -1.29
ZNF540-206ENST00000589117 OR6Q1Q8NGQ2 317 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 NDNFQ8TB73 568 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 SLC38A5Q8WUX1 472 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 APH1BQ8WW43 257 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 HERVK_113Q902F9 699 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 GGHQ92820 318 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 BADQ92934 168 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 UBE2FQ969M7 185 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 TM4SF18Q96CE8 201 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 DACH2Q96NX9 599 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 IL17FQ96PD4 163 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 F2RL3Q96RI0 385 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 SIGLEC11Q96RL6 698 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 RACGAP1Q9H0H5 632 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 DCSTAMPQ9H295 470 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 WDR26Q9H7D7 661 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 RMI1Q9H9A7 625 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 SEMA3GQ9NS98 782 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 CHCHD3Q9NX63 227 aaKnown RBP7.02□□□□□ -1.29
ZNF540-206ENST00000589117 TAS2R7Q9NYW3 318 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 P2RX2Q9UBL9 471 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 AASSQ9UDR5 926 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 SLC9A8Q9Y2E8 581 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 KLK4Q9Y5K2 254 aa7.02□□□□□ -1.29
ZNF540-206ENST00000589117 NUP214P35658 2090 aaPredicted RBP7.02□□□□□ -1.29
ZNF540-206ENST00000589117 PRAMEF33A0A0G2JMD5 474 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 FUOMA2VDF0 154 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 ISPDA4D126 451 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 IGLON5A6NGN9 336 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 CHURC1-FNTBB4DL54 471 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 H7BY64 318 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TAF4O00268 1085 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 FAAHO00519 579 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 NDUFS4O43181 175 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TBX1O43435 398 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 PRAMEF10O60809 474 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 LCKP06239 509 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 BCHEP06276 602 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TFPTP0C1Z6 253 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 TNFRSF1BP20333 461 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 C5AR1P21730 350 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 BSGP35613 385 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 EIF2DP41214 584 aaKnown RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 SSR2P43308 183 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 GSSP48637 474 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 CLCNKAP51800 687 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 PPP5CP53041 499 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 ARFIP1P53367 373 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 CYP4F2P78329 520 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 REEP5Q00765 189 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 PRDX1Q06830 199 aaKnown RBP7.01□□□□□ -1.29
ZNF540-206ENST00000589117 COX10Q12887 443 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 HSPB3Q12988 150 aa7.01□□□□□ -1.29
ZNF540-206ENST00000589117 SLC9A5Q14940 896 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms