RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 GPR75O95800 540 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 IL2RAP01589 272 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 HOXB4P17483 251 aaPredicted RBP12.85□□□□□ -0.35
VMP1-209ENST00000588915 GP5P40197 560 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 RPL21P46778 160 aaKnown RBP12.85□□□□□ -0.35
VMP1-209ENST00000588915 SLC37A1P57057 533 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 RAB10P61026 200 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 CEBPEQ15744 281 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 PRAMEF20Q5VT98 475 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 GRHL2Q6ISB3 625 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 RNF111Q6ZNA4 994 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 CDC20BQ86Y33 519 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 KIF18BQ86Y91 864 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 CREG2Q8IUH2 290 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 OR4N5Q8IXE1 308 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 RELL2Q8NC24 303 aaPredicted RBP12.85□□□□□ -0.35
VMP1-209ENST00000588915 FAM13CQ8NE31 585 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 OR10G3Q8NGC4 313 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 UBTD2Q8WUN7 234 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 PPWD1Q96BP3 646 aaKnown RBP12.85□□□□□ -0.35
VMP1-209ENST00000588915 DOHHQ9BU89 302 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 WWTR1Q9GZV5 400 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 PRDM14Q9GZV8 571 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 LIME1Q9H400 295 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 DLL4Q9NR61 685 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 LYARQ9NX58 379 aaKnown RBP12.85□□□□□ -0.35
VMP1-209ENST00000588915 PSD3Q9NYI0 1048 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 NUDT4Q9NZJ9 180 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 OPTCQ9UBM4 332 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 CNOT11Q9UKZ1 510 aaKnown RBP12.85□□□□□ -0.35
VMP1-209ENST00000588915 ACANP16112 2415 aa12.85□□□□□ -0.35
VMP1-209ENST00000588915 CCDC189A1A4V9 331 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 HRKO00198 91 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 CDH16O75309 829 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 HPNP05981 417 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 PCNAP12004 261 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 EPB42P16452 691 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 BMP5P22003 454 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 PTX3P26022 381 aaPredicted RBP12.84□□□□□ -0.35
VMP1-209ENST00000588915 SPRP35270 261 aaPredicted RBP12.84□□□□□ -0.35
VMP1-209ENST00000588915 RAP1GDS1P52306 607 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 HERVK_113P63132 956 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 ERVK-8P63133 956 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 RPP38P78345 283 aaKnown RBP12.84□□□□□ -0.35
VMP1-209ENST00000588915 CRYZQ08257 329 aaKnown RBP12.84□□□□□ -0.35
VMP1-209ENST00000588915 DUSP8Q13202 625 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 EBPQ15125 230 aaKnown RBP12.84□□□□□ -0.35
VMP1-209ENST00000588915 ACSF3Q4G176 576 aaPredicted RBP12.84□□□□□ -0.35
VMP1-209ENST00000588915 NHSL2Q5HYW2 709 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 LIPJQ5W064 366 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 MRM1Q6IN84 353 aaKnown RBP12.84□□□□□ -0.35
VMP1-209ENST00000588915 POMZP3Q6PJE2 187 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 DGAT2L6Q6ZPD8 337 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 ISCA2Q86U28 154 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 TNIP2Q8NFZ5 429 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 HUS1BQ8NHY5 278 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 RIT1Q92963 219 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 HSPBAP1Q96EW2 488 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 ZNF597Q96LX8 424 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 TIMP4Q99727 224 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 ERVK-6Q9BXR3 956 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 SLC6A15Q9H2J7 730 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 OR51B5Q9H339 312 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 NMRAL1Q9HBL8 299 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 PRM3Q9NNZ6 103 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 SNX15Q9NRS6 342 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 ERVK-19Q9WJR5 959 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 PCDHGA11Q9Y5H2 935 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 ABCA2Q9BZC7 2435 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 NINQ8N4C6 2090 aa12.84□□□□□ -0.35
VMP1-209ENST00000588915 C2orf92A0A1B0GVN3 265 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 CD8B2A6NJW9 211 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 FAM159BA6NKW6 160 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 SAP18O00422 153 aaKnown RBP12.83□□□□□ -0.36
VMP1-209ENST00000588915 OR10H2O60403 315 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 KERAO60938 352 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 IL18BPO95998 194 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 GSTA2P09210 222 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 SLC35E2BP0CK96 405 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 SLC35E2P0CK97 266 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 EPXP11678 715 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 GDF1P27539 372 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 SSTR1P30872 391 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 TMED10P49755 219 aaKnown RBP12.83□□□□□ -0.36
VMP1-209ENST00000588915 DGKQP52824 942 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 ADAM8P78325 824 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 PHEXP78562 749 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 SORDQ00796 357 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 FOXD4Q12950 439 aaPredicted RBP12.83□□□□□ -0.36
VMP1-209ENST00000588915 CUL3Q13618 768 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 ZNF267Q14586 743 aaPredicted RBP12.83□□□□□ -0.36
VMP1-209ENST00000588915 RPS6KA2Q15349 733 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 GRTP1Q5TC63 336 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 NSUN5P2Q63ZY6 315 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 VASNQ6EMK4 673 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 CCDC91Q7Z6B0 441 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 PACS2Q86VP3 889 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 ZNF441Q8N8Z8 693 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 NAXEQ8NCW5 288 aa12.83□□□□□ -0.36
VMP1-209ENST00000588915 DIO2Q92813 273 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms