RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 NTRK2Q16620 822 aa19.88■□□□□ 0.77
CAPNS1-205ENST00000588780 C18orf21Q32NC0 220 aaPredicted RBP19.88■□□□□ 0.77
CAPNS1-205ENST00000588780 ADPRMQ3LIE5 342 aa19.88■□□□□ 0.77
CAPNS1-205ENST00000588780 ZPLD1Q8TCW7 415 aa19.88■□□□□ 0.77
CAPNS1-205ENST00000588780 TMEM158Q8WZ71 300 aa19.88■□□□□ 0.77
CAPNS1-205ENST00000588780 ZFP3Q96NJ6 502 aa19.88■□□□□ 0.77
CAPNS1-205ENST00000588780 FAM111AQ96PZ2 611 aa19.88■□□□□ 0.77
CAPNS1-205ENST00000588780 ERVK-6Q9BXR3 956 aa19.88■□□□□ 0.77
CAPNS1-205ENST00000588780 ACBD3Q9H3P7 528 aa19.88■□□□□ 0.77
CAPNS1-205ENST00000588780 PRDM7Q9NQW5 492 aa19.88■□□□□ 0.77
CAPNS1-205ENST00000588780 ERVK-19Q9WJR5 959 aa19.88■□□□□ 0.77
CAPNS1-205ENST00000588780 VWA7Q9Y334 891 aa19.88■□□□□ 0.77
CAPNS1-205ENST00000588780 DSCAMO60469 2012 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 CDC7O00311 574 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 GNB5O14775 395 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 SMNDC1O75940 238 aaKnown RBP eCLIP19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 IGKV3-11P04433 115 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 SLCO1A2P46721 670 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 HNMTP50135 292 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 FBXW4P57775 412 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 DMTNQ08495 405 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 ZNF267Q14586 743 aaPredicted RBP19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 CRYMQ14894 314 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 RPS6KA2Q15349 733 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 NHSL2Q5HYW2 709 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 ADNP2Q6IQ32 1131 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 YRDCQ86U90 279 aaKnown RBP19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 ACOT4Q8N9L9 421 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 SRFBP1Q8NEF9 429 aaKnown RBP19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 NTNG2Q96CW9 530 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 FBXL20Q96IG2 436 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 WFIKKN1Q96NZ8 548 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 TUBA1CQ9BQE3 449 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 GSX2Q9BZM3 304 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 WWTR1Q9GZV5 400 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 NT5DC2Q9H857 520 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 TEX10Q9NXF1 929 aaPredicted RBP19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 PACSIN3Q9UKS6 424 aa19.87■□□□□ 0.77
CAPNS1-205ENST00000588780 ANKRD33BA6NCL7 494 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 RTCAO00442 366 aaKnown RBP19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 OR10H2O60403 315 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 SH3BGRLO75368 114 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 RCBTB2O95199 551 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 PGAM1P18669 254 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 NAGLUP54802 743 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 PPP1R3AQ16821 1122 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 AP5B1Q2VPB7 878 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 HLA-DQA1Q5Y7H0 255 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 FAM45BPQ6NSW5 357 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 PLXDC2Q6UX71 529 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 DGAT2L6Q6ZPD8 337 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 VN1R5Q7Z5H4 357 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 AGGF1Q8N302 714 aaeCLIP19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 FAM45AQ8TCE6 357 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 SIGLEC10Q96LC7 697 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 TBCDQ9BTW9 1192 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 CAPS2Q9BXY5 557 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 PITHD1Q9GZP4 211 aaPredicted RBP19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 RBSNQ9H1K0 784 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 UBQLN3Q9H347 655 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 SLC17A6Q9P2U8 582 aa19.86■□□□□ 0.77
CAPNS1-205ENST00000588780 NCF1BA6NI72 391 aaPredicted RBP19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 NCF1CA8MVU1 366 aaPredicted RBP19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 A8MXE2 369 aa19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 DEFB108AA8MXU0 73 aa19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 TBX6O95947 436 aaPredicted RBP19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 ACTL6AO96019 429 aa19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 TP53P04637 393 aaPredicted RBP19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 NCF1P14598 390 aaPredicted RBP19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 ATP5A1P25705 553 aaKnown RBP19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 SSR2P43308 183 aa19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 RPP38P78345 283 aaKnown RBP19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 FAM27E3Q08E93 113 aa19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 KBTBD12Q3ZCT8 623 aa19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 ZNF793Q6ZN11 406 aa19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 PLEKHM3Q6ZWE6 761 aa19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 SNX31Q8N9S9 440 aa19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 PPP1R14CQ8TAE6 165 aa19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 UCN3Q969E3 161 aa19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 ZC3HAV1LQ96H79 300 aaKnown RBP19.85■□□□□ 0.77
CAPNS1-205ENST00000588780 SIAH2O43255 324 aa19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 ALOX15P16050 662 aaPredicted RBP19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 SOX18P35713 384 aa19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 MC3RP41968 323 aa19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 NR1H2P55055 460 aa19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 GAB1Q13480 694 aa19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 SETDB1Q15047 1291 aa19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 HIST2H2ACQ16777 129 aaPredicted RBP19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 HIST2H2AA3Q6FI13 130 aa19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 FAM83FQ8NEG4 500 aaPredicted RBP19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 SPPL2AQ8TCT8 520 aa19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 TMEM171Q8WVE6 324 aa19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 PDLIM5Q96HC4 596 aaKnown RBP19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 ANGPTL4Q9BY76 406 aa19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 PHACTR1Q9C0D0 580 aa19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 RPF2Q9H7B2 306 aaKnown RBP19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 OARD1Q9Y530 152 aa19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 IKBKGQ9Y6K9 419 aa19.84■□□□□ 0.77
CAPNS1-205ENST00000588780 MED12Q93074 2177 aa19.83■□□□□ 0.77
CAPNS1-205ENST00000588780 C2orf92A0A1B0GVN3 265 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms