RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CLPSP04118 112 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 RFPL3SP0C7P2 107 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 TLE4Q04727 773 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 TFF3Q07654 80 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 BIKQ13323 160 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 CUL3Q13618 768 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 SLC10A1Q14973 349 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 HYAL4Q2M3T9 481 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 SPRED3Q2MJR0 410 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 FAM219BQ5XKK7 198 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 SLC22A10Q63ZE4 541 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 TMEM64Q6YI46 380 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 RNF111Q6ZNA4 994 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 RPS27LQ71UM5 84 aaKnown RBP13.22□□□□□ -0.29
VMP1-206ENST00000587945 SLC29A4Q7RTT9 530 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 FAM13CQ8NE31 585 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 C7orf57Q8NEG2 295 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 OR10G3Q8NGC4 313 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 PAQR8Q8TEZ7 354 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 CHTF18Q8WVB6 975 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 SLC44A1Q8WWI5 657 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 ATP6V1E2Q96A05 226 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 SPACA9Q96E40 222 aaPredicted RBP13.22□□□□□ -0.29
VMP1-206ENST00000587945 C14orf79Q96F83 325 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 WWTR1Q9GZV5 400 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 CDC42EP4Q9H3Q1 356 aaKnown RBP13.22□□□□□ -0.29
VMP1-206ENST00000587945 LDAHQ9H6V9 325 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 PROK2Q9HC23 129 aa13.22□□□□□ -0.29
VMP1-206ENST00000587945 DMGDHQ9UI17 866 aaKnown RBP13.22□□□□□ -0.29
VMP1-206ENST00000587945 PDZD2O15018 2839 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 GTF3C1Q12789 2109 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 A0A1B0GVC2 190 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 FOXE1O00358 373 aaPredicted RBP13.21□□□□□ -0.29
VMP1-206ENST00000587945 BCKDKO14874 412 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 TOXO94900 526 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 INHBAP08476 426 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 ACVR2AP27037 513 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 SSTR4P31391 388 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 MAGEA12P43365 314 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 MAN2A2P49641 1150 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 CCNG1P51959 295 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 ARFIP1P53367 373 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 SLC37A1P57057 533 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 KCNJ2P63252 427 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 EBPQ15125 230 aaKnown RBP13.21□□□□□ -0.29
VMP1-206ENST00000587945 SGO1Q5FBB7 561 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 RTL6Q6ICC9 239 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 ACAD11Q709F0 780 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 NUDT13Q86X67 352 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 NOA1Q8NC60 698 aaKnown RBP13.21□□□□□ -0.29
VMP1-206ENST00000587945 OR10Q1Q8NGQ4 319 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 UHMK1Q8TAS1 419 aaKnown RBP13.21□□□□□ -0.29
VMP1-206ENST00000587945 IFT81Q8WYA0 676 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 C16orf45Q96MC5 204 aaPredicted RBP13.21□□□□□ -0.29
VMP1-206ENST00000587945 TREX2Q9BQ50 279 aaPredicted RBP13.21□□□□□ -0.29
VMP1-206ENST00000587945 PELOQ9BRX2 385 aaKnown RBP13.21□□□□□ -0.29
VMP1-206ENST00000587945 ZBTB26Q9HCK0 441 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.21□□□□□ -0.29
VMP1-206ENST00000587945 TEX10Q9NXF1 929 aaPredicted RBP13.21□□□□□ -0.29
VMP1-206ENST00000587945 ALKBH4Q9NXW9 302 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 SPRR3Q9UBC9 169 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 XPR1Q9UBH6 696 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 MTRF1LQ9UGC7 380 aaKnown RBP13.21□□□□□ -0.29
VMP1-206ENST00000587945 PCTPQ9UKL6 214 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 ACAD8Q9UKU7 415 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 FAM215AQ9Y5M1 114 aa13.21□□□□□ -0.29
VMP1-206ENST00000587945 TRGV5A0A0B4J1U4 118 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 OR14I1A6ND48 311 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 LRRC3CA6NJW4 275 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 PPP6CO00743 305 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 AQP7O14520 342 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 KLK1P06870 262 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 RBP1P09455 135 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 FBXO45P0C2W1 286 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 CT62P0C5K7 136 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 SLC35E2P0CK97 266 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 GLI4P10075 376 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 IGFBP2P18065 325 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 ENDOUP21128 410 aaKnown RBP13.2□□□□□ -0.3
VMP1-206ENST00000587945 TRAF3Q13114 568 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 FRG2Q64ET8 278 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 TTC19Q6DKK2 380 aaPredicted RBP13.2□□□□□ -0.3
VMP1-206ENST00000587945 RELL1Q8IUW5 271 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 FBXW8Q8N3Y1 598 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 SLC15A4Q8N697 577 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 ISL2Q96A47 359 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 JSRP1Q96MG2 331 aaPredicted RBP13.2□□□□□ -0.3
VMP1-206ENST00000587945 FRG2BQ96QU4 278 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 PAFAH2Q99487 392 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 SERPINI1Q99574 410 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 TTYH2Q9BSA4 534 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 FUT8Q9BYC5 575 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 MRPL1Q9BYD6 325 aaKnown RBP13.2□□□□□ -0.3
VMP1-206ENST00000587945 EXO5Q9H790 373 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 ZNF703Q9H7S9 590 aaPredicted RBP13.2□□□□□ -0.3
VMP1-206ENST00000587945 WDR41Q9HAD4 459 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 MCCC2Q9HCC0 563 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 ZFP64Q9NPA5 681 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 KCNJ16Q9NPI9 418 aa13.2□□□□□ -0.3
VMP1-206ENST00000587945 PSD3Q9NYI0 1048 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms