RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 Q9H521 79 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 C3orf14Q9HBI5 128 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 A4GALTQ9NPC4 353 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 C8orf4Q9NR00 106 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 THUMPD1Q9NXG2 353 aaKnown RBP18.68■□□□□ 0.58
TRIM47-204ENST00000587339 C7orf72A4D263 438 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 C5orf58C9J3I9 102 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 UPK1AO00322 258 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 BCHEP06276 602 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 CNR2P34972 360 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 HOXD12P35452 270 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 MC3RP41968 323 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 SELENOWP63302 87 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 ELOAQ14241 798 aaKnown RBP18.68■□□□□ 0.58
TRIM47-204ENST00000587339 TCTE1Q5JU00 501 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 REEP3Q6NUK4 255 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 SPRED1Q7Z699 444 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 OR56A1Q8NGH5 318 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 OR4C6Q8NH72 309 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 SLC38A5Q8WUX1 472 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 TMBIM1Q969X1 311 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 DOHHQ9BU89 302 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 GAREM1Q9H706 876 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 AP4B1Q9Y6B7 739 aa18.68■□□□□ 0.58
TRIM47-204ENST00000587339 A0A0A6YYC8 382 aaPredicted RBP18.67■□□□□ 0.58
TRIM47-204ENST00000587339 I3L1I5 382 aaPredicted RBP18.67■□□□□ 0.58
TRIM47-204ENST00000587339 M0QX08 132 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 EMC8O43402 210 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 RASAL1O95294 804 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 IFNA14P01570 189 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 OPN1SWP03999 348 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 FABP3P05413 133 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 MATN1P21941 496 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 CD1CP29017 333 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 ARL4DP49703 201 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 PCBP3P57721 371 aaKnown RBP18.67■□□□□ 0.58
TRIM47-204ENST00000587339 CFHR1Q03591 330 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 FAM53BQ14153 422 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 LTB4RQ15722 352 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 CRB2Q5IJ48 1285 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 NIPAL1Q6NVV3 410 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 SLC44A2Q8IWA5 706 aaPredicted RBP18.67■□□□□ 0.58
TRIM47-204ENST00000587339 SHISA5Q8N114 240 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 OR51I1Q9H343 314 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 SERHL2Q9H4I8 314 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 BAG5Q9UL15 447 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 CABIN1Q9Y6J0 2220 aa18.67■□□□□ 0.58
TRIM47-204ENST00000587339 HYKKA2RU49 373 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 TMEM247A6NEH6 219 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 EI24O14681 340 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 YKT6O15498 198 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 LDB3O75112 727 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 SEMG1P04279 462 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 HMGN2P05204 90 aaKnown RBP18.66■□□□□ 0.58
TRIM47-204ENST00000587339 TFPTP0C1Z6 253 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 CPMP14384 443 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 CSF2RBP32927 897 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 MAGEA8P43361 318 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 SEPHS1P49903 392 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 ANXA11P50995 505 aaKnown RBP18.66■□□□□ 0.58
TRIM47-204ENST00000587339 RAB38P57729 211 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 HSD11B2P80365 405 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 LASP1Q14847 261 aaKnown RBP18.66■□□□□ 0.58
TRIM47-204ENST00000587339 MYBPC3Q14896 1274 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 SNAP47Q5SQN1 464 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 GARNL3Q5VVW2 1013 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 OR5D16Q8NGK9 328 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 LZICQ8WZA0 190 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 KAT2AQ92830 837 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 TANKQ92844 425 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 CCDC74AQ96AQ1 378 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 TRPC4Q9UBN4 977 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 ZNF639Q9UID6 485 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 FAM227AF5H4B4 570 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 CHST10O43529 356 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 FOXS1O43638 330 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 MED26O95402 600 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 OR12D1P0DN82 309 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 PORP16435 677 aaPredicted RBP18.66■□□□□ 0.58
TRIM47-204ENST00000587339 KHKP50053 298 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 KCNAB1Q14722 419 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 C6orf52Q5T4I8 152 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 WDR74Q6RFH5 385 aaPredicted RBP18.66■□□□□ 0.58
TRIM47-204ENST00000587339 RABEPKQ7Z6M1 372 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 PATL1Q86TB9 770 aaKnown RBP18.66■□□□□ 0.58
TRIM47-204ENST00000587339 ZDHHC13Q8IUH4 622 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 TMEM52Q8NDY8 209 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 NUP43Q8NFH3 380 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 OR6C4Q8NGE1 309 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 CEP76Q8TAP6 659 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 XAGE5Q8WWM1 108 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 TAMM41Q96BW9 452 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 TMEM19Q96HH6 336 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 TMEM9Q9P0T7 183 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 P2RX2Q9UBL9 471 aa18.66■□□□□ 0.58
TRIM47-204ENST00000587339 MN1Q10571 1320 aaPredicted RBP18.66■□□□□ 0.58
TRIM47-204ENST00000587339 hCG_2039718K7EN88 272 aa18.65■□□□□ 0.58
TRIM47-204ENST00000587339 DENRO43583 198 aaKnown RBP18.65■□□□□ 0.58
TRIM47-204ENST00000587339 FGF17O60258 216 aa18.65■□□□□ 0.58
TRIM47-204ENST00000587339 CLCN2P51788 898 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms