RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 RPS13P62277 151 aaKnown RBP15.09■□□□□ 0.01
LSM12-202ENST00000585388 HERVK_113P63132 956 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 ERVK-8P63133 956 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 CUL3Q13618 768 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 SLC25A35Q3KQZ1 300 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 PRAMEF20Q5VT98 475 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 C18orf63Q68DL7 685 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 RTL6Q6ICC9 239 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 KLC3Q6P597 504 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 ADGRD1Q6QNK2 874 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 CYP20A1Q6UW02 462 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 LYPD8Q6UX82 237 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 NUDT13Q86X67 352 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 ERVK-6Q9BXR3 956 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 SEMA4BQ9NPR2 832 aaPredicted RBP15.09■□□□□ 0.01
LSM12-202ENST00000585388 ERVK-19Q9WJR5 959 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 PCDHGB3Q9Y5G1 929 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 TNPO3Q9Y5L0 923 aaKnown RBP15.09■□□□□ 0.01
LSM12-202ENST00000585388 ARHGAP21Q5T5U3 1957 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 C2CD3Q4AC94 2353 aa15.09■□□□□ 0.01
LSM12-202ENST00000585388 A0A0A6YYD5 115 aa15.08■□□□□ 0
LSM12-202ENST00000585388 A0A0G2JNJ9 132 aa15.08■□□□□ 0
LSM12-202ENST00000585388 HRKO00198 91 aa15.08■□□□□ 0
LSM12-202ENST00000585388 PRKRAO75569 313 aaKnown RBP15.08■□□□□ 0
LSM12-202ENST00000585388 ZWINTO95229 277 aa15.08■□□□□ 0
LSM12-202ENST00000585388 C2P06681 752 aa15.08■□□□□ 0
LSM12-202ENST00000585388 CD1EP15812 388 aa15.08■□□□□ 0
LSM12-202ENST00000585388 GALNSP34059 522 aa15.08■□□□□ 0
LSM12-202ENST00000585388 SLC37A1P57057 533 aa15.08■□□□□ 0
LSM12-202ENST00000585388 IRF9Q00978 393 aa15.08■□□□□ 0
LSM12-202ENST00000585388 ZNF267Q14586 743 aaPredicted RBP15.08■□□□□ 0
LSM12-202ENST00000585388 ACAP2Q15057 778 aa15.08■□□□□ 0
LSM12-202ENST00000585388 EBPQ15125 230 aaKnown RBP15.08■□□□□ 0
LSM12-202ENST00000585388 PFKFB4Q16877 469 aa15.08■□□□□ 0
LSM12-202ENST00000585388 TBCELQ5QJ74 424 aa15.08■□□□□ 0
LSM12-202ENST00000585388 RIPPLY2Q5TAB7 128 aa15.08■□□□□ 0
LSM12-202ENST00000585388 OR52E8Q6IFG1 317 aa15.08■□□□□ 0
LSM12-202ENST00000585388 MRM1Q6IN84 353 aaKnown RBP15.08■□□□□ 0
LSM12-202ENST00000585388 METTL2BQ6P1Q9 378 aaKnown RBP15.08■□□□□ 0
LSM12-202ENST00000585388 DGAT2L6Q6ZPD8 337 aa15.08■□□□□ 0
LSM12-202ENST00000585388 TAGAPQ8N103 731 aa15.08■□□□□ 0
LSM12-202ENST00000585388 LRRC25Q8N386 305 aaPredicted RBP15.08■□□□□ 0
LSM12-202ENST00000585388 LIX1Q8N485 282 aa15.08■□□□□ 0
LSM12-202ENST00000585388 OR10G3Q8NGC4 313 aa15.08■□□□□ 0
LSM12-202ENST00000585388 RIT1Q92963 219 aa15.08■□□□□ 0
LSM12-202ENST00000585388 ZNF597Q96LX8 424 aa15.08■□□□□ 0
LSM12-202ENST00000585388 ZNF717Q9BY31 904 aaPredicted RBP15.08■□□□□ 0
LSM12-202ENST00000585388 DDX31Q9H8H2 851 aaKnown RBP15.08■□□□□ 0
LSM12-202ENST00000585388 SNX15Q9NRS6 342 aa15.08■□□□□ 0
LSM12-202ENST00000585388 PSD3Q9NYI0 1048 aa15.08■□□□□ 0
LSM12-202ENST00000585388 SPRR3Q9UBC9 169 aa15.08■□□□□ 0
LSM12-202ENST00000585388 Q9UFV3 132 aa15.08■□□□□ 0
LSM12-202ENST00000585388 ASB4Q9Y574 426 aa15.08■□□□□ 0
LSM12-202ENST00000585388 CHCHD2Q9Y6H1 151 aaPredicted RBP15.08■□□□□ 0
LSM12-202ENST00000585388 NCKAP5O14513 1909 aa15.07■□□□□ 0
LSM12-202ENST00000585388 MED13LQ71F56 2210 aa15.07■□□□□ 0
LSM12-202ENST00000585388 LRRC3CA6NJW4 275 aa15.07■□□□□ 0
LSM12-202ENST00000585388 CAPN14A8MX76 684 aa15.07■□□□□ 0
LSM12-202ENST00000585388 EEDO75530 441 aaKnown RBP15.07■□□□□ 0
LSM12-202ENST00000585388 FAM58BPP0C7Q3 252 aa15.07■□□□□ 0
LSM12-202ENST00000585388 ENDOUP21128 410 aaKnown RBP15.07■□□□□ 0
LSM12-202ENST00000585388 BSGP35613 385 aa15.07■□□□□ 0
LSM12-202ENST00000585388 TMED10P49755 219 aaKnown RBP15.07■□□□□ 0
LSM12-202ENST00000585388 SERPINB8P50452 374 aa15.07■□□□□ 0
LSM12-202ENST00000585388 GTF2H2Q13888 395 aa15.07■□□□□ 0
LSM12-202ENST00000585388 PCBP2Q15366 365 aaKnown RBP eCLIP15.07■□□□□ 07e-24■■■■■ 97.7
LSM12-202ENST00000585388 NTRK2Q16620 822 aa15.07■□□□□ 0
LSM12-202ENST00000585388 CPSF6Q16630 551 aaKnown RBP eCLIP15.07■□□□□ 0
LSM12-202ENST00000585388 MROH9Q5TGP6 573 aa15.07■□□□□ 0
LSM12-202ENST00000585388 GTF2H2CQ6P1K8 395 aa15.07■□□□□ 0
LSM12-202ENST00000585388 ZDHHC24Q6UX98 284 aa15.07■□□□□ 0
LSM12-202ENST00000585388 NEIL3Q8TAT5 605 aa15.07■□□□□ 0
LSM12-202ENST00000585388 DOHHQ9BU89 302 aa15.07■□□□□ 0
LSM12-202ENST00000585388 IPPKQ9H8X2 491 aa15.07■□□□□ 0
LSM12-202ENST00000585388 ACKR4Q9NPB9 350 aa15.07■□□□□ 0
LSM12-202ENST00000585388 A0A1W2PR48 441 aa15.06■□□□□ 0
LSM12-202ENST00000585388 GLOD5A6NK44 160 aa15.06■□□□□ 0
LSM12-202ENST00000585388 FOXE1O00358 373 aaPredicted RBP15.06■□□□□ 0
LSM12-202ENST00000585388 TP53I11O14683 189 aa15.06■□□□□ 0
LSM12-202ENST00000585388 TMPRSS11DO60235 418 aa15.06■□□□□ 0
LSM12-202ENST00000585388 SEMA3DO95025 777 aa15.06■□□□□ 0
LSM12-202ENST00000585388 KLHL2O95198 593 aa15.06■□□□□ 0
LSM12-202ENST00000585388 AIFM1O95831 613 aa15.06■□□□□ 0
LSM12-202ENST00000585388 RFPL3SP0C7P2 107 aa15.06■□□□□ 0
LSM12-202ENST00000585388 SLC35E2P0CK97 266 aa15.06■□□□□ 0
LSM12-202ENST00000585388 GDF1P27539 372 aa15.06■□□□□ 0
LSM12-202ENST00000585388 CASQ1P31415 396 aa15.06■□□□□ 0
LSM12-202ENST00000585388 ARL1P40616 181 aaPredicted RBP15.06■□□□□ 0
LSM12-202ENST00000585388 PEX19P40855 299 aa15.06■□□□□ 0
LSM12-202ENST00000585388 RPS6KA2Q15349 733 aa15.06■□□□□ 0
LSM12-202ENST00000585388 C6orf163Q5TEZ5 329 aa15.06■□□□□ 0
LSM12-202ENST00000585388 GOLGA7Q7Z5G4 137 aa15.06■□□□□ 0
LSM12-202ENST00000585388 WDR53Q7Z5U6 358 aaPredicted RBP15.06■□□□□ 0
LSM12-202ENST00000585388 L3MBTL4Q8NA19 623 aa15.06■□□□□ 0
LSM12-202ENST00000585388 WDR20Q8TBZ3 569 aa15.06■□□□□ 0
LSM12-202ENST00000585388 JSRP1Q96MG2 331 aaPredicted RBP15.06■□□□□ 0
LSM12-202ENST00000585388 SERPINI1Q99574 410 aa15.06■□□□□ 0
LSM12-202ENST00000585388 SLC6A15Q9H2J7 730 aa15.06■□□□□ 0
LSM12-202ENST00000585388 ALKBH4Q9NXW9 302 aa15.06■□□□□ 0
LSM12-202ENST00000585388 CPSF2Q9P2I0 782 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms