RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	WWP2	O00308	870 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	UBFD1	O14562	309 aa	Known RBP	12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	COPE	O14579	308 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	OR10H2	O60403	315 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	ZNF354A	O60765	605 aa	Predicted RBP	12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	OR6B1	O95007	311 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	UNC5C	O95185	931 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	ESRRB	O95718	433 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	CHN1	P15882	459 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	GALNS	P34059	522 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	SOX3	P41225	446 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	CCT5	P48643	541 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	MAPK12	P53778	367 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	DNAJB13	P59910	316 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	ERVK-8	P63133	956 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	ART3	Q13508	389 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	CCNYL2	Q5T2Q4	361 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	GFRAL	Q6UXV0	394 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	FRMD7	Q6ZUT3	714 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	MDGA2	Q7Z553	956 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	GPALPP1	Q8IXQ4	340 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	C4orf33	Q8N1A6	199 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	RIBC1	Q8N443	379 aa	Predicted RBP	12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	CPSF7	Q8N684	471 aa	Known RBP	12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	C1orf52	Q8N6N3	182 aa	Known RBP	12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	NUBPL	Q8TB37	319 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	METTL6	Q8TCB7	284 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	SREK1	Q8WXA9	508 aa	Known RBP	12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	ASB15	Q8WXK1	588 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	CAVIN3	Q969G5	261 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	RELT	Q969Z4	430 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	RBM18	Q96H35	190 aa	Known RBP	12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	ART5	Q96L15	291 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	GPR137	Q96N19	417 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	KCNA7	Q96RP8	456 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	ACPT	Q9BZG2	426 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	MKS1	Q9NXB0	559 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	VPS29	Q9UBQ0	182 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	SEC14L3	Q9UDX4	400 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	LGALS13	Q9UHV8	139 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	GRID1	Q9ULK0	1009 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760	ERVK-19	Q9WJR5	959 aa		12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760		V9GYY5	206 aa	Predicted RBP	12.33	□□□□□ -0.44
SREBF1-223	ENST00000584760		A8MVJ9	347 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	DYRK3	O43781	588 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	ULK1	O75385	1050 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	CLPS	P04118	112 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	SLC35E2	P0CK97	266 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	HMOX2	P30519	316 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	NAGLU	P54802	743 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	FOXA1	P55317	472 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	NAA20	P61599	178 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	ALDH6A1	Q02252	535 aa	Known RBP	12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	MPEG1	Q2M385	716 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	RNFT1	Q5M7Z0	435 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	SLC48A1	Q6P1K1	146 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	GDF7	Q7Z4P5	450 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	TRABD2A	Q86V40	505 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	MMP21	Q8N119	569 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	CCNYL1	Q8N7R7	359 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	GBP7	Q8N8V2	638 aa	Predicted RBP	12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	PSD4	Q8NDX1	1056 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	OR5L2	Q8NGL0	311 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	DOK4	Q8TEW6	326 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	CHTF18	Q8WVB6	975 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	RIT1	Q92963	219 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	APOPT1	Q96IL0	206 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	CNPPD1	Q9BV87	410 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	MID1IP1	Q9NPA3	183 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	OXSM	Q9NWU1	459 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	NMRK1	Q9NWW6	199 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	HPF1	Q9NWY4	346 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	CES1P1	Q9UKY3	287 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	TIMM22	Q9Y584	194 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	PCDHA9	Q9Y5H5	950 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	MYO7B	Q6PIF6	2116 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	PDZD2	O15018	2839 aa		12.32	□□□□□ -0.44
SREBF1-223	ENST00000584760	NCOA6	Q14686	2063 aa	Predicted RBP	12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	NCKAP5	O14513	1909 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	TLDC2	A0PJX2	215 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	C1orf226	A1L170	272 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	ESPN	B1AK53	854 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	GUCY1B2	O75343	617 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	NADK	O95544	446 aa	Predicted RBP	12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	CPA3	P15088	417 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	ZNF24	P17028	368 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	PIK3R1	P27986	724 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	MEOX1	P50221	254 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	SLC37A1	P57057	533 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	RAE1	P78406	368 aa	Known RBP	12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	HMGCS1	Q01581	520 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	ZNF267	Q14586	743 aa	Predicted RBP	12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	PCLAF	Q15004	111 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	EBP	Q15125	230 aa	Known RBP	12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	LIPM	Q5VYY2	423 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	RNF111	Q6ZNA4	994 aa		12.31	□□□□□ -0.44
SREBF1-223	ENST00000584760	SULF2	Q8IWU5	870 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms