RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 TRPM8Q7Z2W7 1104 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 ANKRD37Q7Z713 158 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 RAB43Q86YS6 212 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 FITM2Q8N6M3 262 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 OR5P2Q8WZ92 322 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 VPS33AQ96AX1 596 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 NACC2Q96BF6 587 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 NAF1Q96HR8 494 aaKnown RBP17.15■□□□□ 0.34
RFFL-211ENST00000584541 ITCHQ96J02 903 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 AMDHD1Q96NU7 426 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 DPH1Q9BZG8 443 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 GLIPR2Q9H4G4 154 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 PNO1Q9NRX1 252 aaKnown RBP17.15■□□□□ 0.34
RFFL-211ENST00000584541 LEF1Q9UJU2 399 aaPredicted RBP17.15■□□□□ 0.34
RFFL-211ENST00000584541 NDUFAF1Q9Y375 327 aa17.15■□□□□ 0.34
RFFL-211ENST00000584541 BBIP1A8MTZ0 92 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 CREG1O75629 220 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 CAPN3P20807 821 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 PRDX6P30041 224 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 OTX2P32243 289 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 GALNSP34059 522 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 EFNA3P52797 238 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 WNT3P56703 355 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 HSPB3Q12988 150 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 MLC1Q15049 377 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 ELAVL1Q15717 326 aaKnown RBP17.14■□□□□ 0.33
RFFL-211ENST00000584541 FAM69BQ5VUD6 431 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 LANCL3Q6ZV70 420 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 CPEB2Q7Z5Q1 589 aaKnown RBP17.14■□□□□ 0.33
RFFL-211ENST00000584541 VASH2Q86V25 355 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 SNX32Q86XE0 403 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 RIT1Q92963 219 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 IL17BQ9UHF5 180 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 BTNL2Q9UIR0 455 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 CLDN16Q9Y5I7 305 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 CLCA3PQ9Y6N3 262 aa17.14■□□□□ 0.33
RFFL-211ENST00000584541 LOC100653049A0A140TA62 436 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 A0A1W2PS29 197 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 CAPN14A8MX76 684 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 TLX3O43711 291 aaPredicted RBP17.13■□□□□ 0.33
RFFL-211ENST00000584541 KRT34O76011 436 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 SLITRK5O94991 958 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 CPSF4O95639 269 aaKnown RBP17.13■□□□□ 0.33
RFFL-211ENST00000584541 C6orf47O95873 294 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 COX4I1P13073 169 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 EFNA1P20827 205 aaPredicted RBP17.13■□□□□ 0.33
RFFL-211ENST00000584541 PHC1P78364 1004 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 GABPB1Q06547 395 aaPredicted RBP17.13■□□□□ 0.33
RFFL-211ENST00000584541 SFT2D3Q587I9 215 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 CPZQ66K79 652 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 ANKRD46Q86W74 232 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 TREML1Q86YW5 311 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 TMEM151BQ8IW70 566 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 GALNT12Q8IXK2 581 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 OR4A15Q8NGL6 344 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 OR14A16Q8NHC5 309 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 SUN3Q8TAQ9 357 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 DAZLQ92904 295 aaKnown RBP17.13■□□□□ 0.33
RFFL-211ENST00000584541 GATA6Q92908 595 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 PPWD1Q96BP3 646 aaKnown RBP17.13■□□□□ 0.33
RFFL-211ENST00000584541 CCDC115Q96NT0 180 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 IP6K3Q96PC2 410 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 PANX1Q96RD7 426 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 LPAR4Q99677 370 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 NEUROD4Q9HD90 331 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 SLAMF7Q9NQ25 335 aa17.13■□□□□ 0.33
RFFL-211ENST00000584541 MRPS18BQ9Y676 258 aaKnown RBP17.13■□□□□ 0.33
RFFL-211ENST00000584541 LOC102723996A0A087X1L8 192 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 A8MUA0 341 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 C17orf105B2RV13 164 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 PEX12O00623 359 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 RFXANKO14593 260 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 KLK10O43240 276 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 SCN2BO60939 215 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 ANP32DO95626 131 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 ABCB1P08183 1280 aaPredicted RBP17.12■□□□□ 0.33
RFFL-211ENST00000584541 EEF1A2Q05639 463 aaKnown RBP17.12■□□□□ 0.33
RFFL-211ENST00000584541 DUSP2Q05923 314 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 KRT72Q14CN4 511 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 TERF2Q15554 542 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 C6orf10Q5SRN2 563 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 ZNF551Q7Z340 670 aaPredicted RBP17.12■□□□□ 0.33
RFFL-211ENST00000584541 CLECL1Q8IZS7 167 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 POU5F2Q8N7G0 328 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 PCYOX1LQ8NBM8 494 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 OR9A2Q8NGT5 310 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 ZNF675Q8TD23 568 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 ART5Q96L15 291 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 SLC52A3Q9NQ40 469 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 TAS2R9Q9NYW1 312 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 HS3ST3B1Q9Y662 390 aa17.12■□□□□ 0.33
RFFL-211ENST00000584541 AHCTF1Q8WYP5 2266 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 MED19A0JLT2 244 aaPredicted RBP17.11■□□□□ 0.33
RFFL-211ENST00000584541 CCT8L1PA6NM43 557 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 RRP8O43159 456 aaKnown RBP17.11■□□□□ 0.33
RFFL-211ENST00000584541 CD1EP15812 388 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 TRPC1P48995 793 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 PGDP52209 483 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 MAP4K2Q12851 820 aa17.11■□□□□ 0.33
RFFL-211ENST00000584541 TLR1Q15399 786 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms