RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 TVP23AA6NH52 213 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 PHYHO14832 338 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 HAPLN1P10915 354 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 ACVR1BP36896 505 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 NAA10P41227 235 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 CDKN2CP42773 168 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 NR4A2P43354 598 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 LSSP48449 732 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 ARHGAP40Q5TG30 622 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 MTFR2Q6P444 385 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 ZSCAN4Q8NAM6 433 aaPredicted RBP13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 SULT4A1Q9BR01 284 aa13.93□□□□□ -0.18
CSNK1D-217ENST00000581241 A6NHS1 94 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 GLOD5A6NK44 160 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 SOX1O00570 391 aaPredicted RBP13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 SOCS5O75159 536 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 CFL1P23528 166 aaKnown RBP13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 HYAL2Q12891 473 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 NOGQ13253 232 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 RAB11BQ15907 218 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 PXKQ7Z7A4 578 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 LRR1Q96L50 414 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 ENPP5Q9UJA9 477 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 CD3GP09693 182 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 SNRPD2P62316 118 aaKnown RBP13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 TMEM115Q12893 351 aaPredicted RBP13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 CELF5Q8N6W0 485 aaKnown RBP13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 OR5M3Q8NGP4 307 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 WDR77Q9BQA1 342 aaPredicted RBP13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 DPH2Q9BQC3 489 aaPredicted RBP13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 EPHA6Q9UF33 1036 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 NUBP2Q9Y5Y2 271 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 PEAK1Q9H792 1746 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 ARPC4-TTLL3A0A0A6YYG9 625 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 CRYZL1O95825 349 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 MAGEA11P43364 429 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 BMXP51813 675 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 OR4D1Q15615 310 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 DEFB115Q30KQ5 88 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 OTOP2Q7RTS6 562 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 CNTNAP3BQ96NU0 1288 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 SNTA1Q13424 505 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 KEAP1Q14145 624 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 TXNDC8Q6A555 127 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.92□□□□□ -0.184e-6■■■□□ 14.8
CSNK1D-217ENST00000581241 CCDC116Q8IYX3 515 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 ABHD11Q8NFV4 315 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 CHFRQ96EP1 664 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 OR2S2Q9NQN1 319 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 TAS2R8Q9NYW2 309 aa13.92□□□□□ -0.18
CSNK1D-217ENST00000581241 SOX30O94993 753 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 ERCC1P07992 297 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 RAB3BP20337 219 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 PRRT3Q5FWE3 981 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 GDF6Q6KF10 455 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 TMPRSS9Q7Z410 1059 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 C14orf80Q86SX3 495 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 TRAM1L1Q8N609 369 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 WDR20Q8TBZ3 569 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 ZNF559Q9BR84 538 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 MROQ9BYG7 248 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 RETREG1Q9H6L5 497 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 KLHL9Q9P2J3 617 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 SIX4Q9UIU6 781 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 KCNS2Q9ULS6 477 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 LIPT1Q9Y234 373 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 PFKLP17858 780 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 GABRA3P34903 492 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 RORAP35398 523 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 OPRL1P41146 370 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 CAPZA1P52907 286 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 CES4AQ5XG92 561 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 OR52P1PQ8NH57 321 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 C16orf58Q96GQ5 468 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 TMEM121BQ9BXQ6 578 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 TXLNGYQ9BZA5 131 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 A0A0D9SEW6 157 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 NDUFV2P19404 249 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 AK4P27144 223 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 HNF1BP35680 557 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 LAS2Q8IYD9 372 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 LMO3Q8TAP4 145 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 FKBP10Q96AY3 582 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 URM1Q9BTM9 101 aaKnown RBP13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.91□□□□□ -0.185e-10■■■■■ 31.1
CSNK1D-217ENST00000581241 GPN2Q9H9Y4 310 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 GLS2Q9UI32 602 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 C9J4A7 227 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 LYRM1O43325 122 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 PAK4O96013 591 aaPredicted RBP13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 FHP07954 510 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 CAMLGP49069 296 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 CLDN8P56748 225 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 BCL2L15Q5TBC7 163 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 ACOT13Q9NPJ3 140 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 NLKQ9UBE8 527 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 GXYLT2A0PJZ3 443 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 C11orf98E9PRG8 122 aa13.91□□□□□ -0.18
CSNK1D-217ENST00000581241 GCGRP47871 477 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms