RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 LAX1Q8IWV1 398 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 BEST4Q8NFU0 473 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 OTUB2Q96DC9 234 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 RBM38Q9H0Z9 239 aaKnown RBP17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 NEUROD4Q9HD90 331 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 TDP1Q9NUW8 608 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 FAM183AA6NL82 134 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 NUPL2O15504 423 aaKnown RBP17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 SOX30O94993 753 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 LAG3P18627 525 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 ATF6P18850 670 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 GSTM3P21266 225 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 MTNR1AP48039 350 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 CTSCP53634 463 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 FADDQ13158 208 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 MBTPS1Q14703 1052 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 TEAD2Q15562 447 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 C4orf46Q504U0 113 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 CNIH2Q6PI25 160 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 TMED4Q7Z7H5 227 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 CYB561A3Q8NBI2 242 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 CAMK1GQ96NX5 476 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 B3GNT3Q9Y2A9 372 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 Q9Y3F1 56 aa17.07■□□□□ 0.32
ATPAF1-214ENST00000576409 ANXA2P2A6NMY6 339 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 ANXA2P07355 339 aaKnown RBP17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 ADORA3P0DMS8 318 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 PIK3CBP42338 1070 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 RBBP4Q09028 425 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 NNATQ16517 81 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 TPGS2Q68CL5 300 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 SLC36A4Q6YBV0 504 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 OR52N2Q8NGI0 321 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.06■□□□□ 0.325e-8■■■■□ 23.5
ATPAF1-214ENST00000576409 SMPDL3AQ92484 453 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 PMEPA1Q969W9 287 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 FAM46AQ96IP4 442 aaKnown RBP17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 SLC22A12Q96S37 553 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 NIPSNAP1Q9BPW8 284 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 C1QTNF7Q9BXJ2 289 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 MMP2P08253 660 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 UQCRC2P22695 453 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 EDNRAP25101 427 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 CLCN7P51798 805 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 CPA6Q8N4T0 437 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 LILRA3Q8N6C8 439 aaPredicted RBP17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 LSM14AQ8ND56 463 aaKnown RBP17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 HMGCLL1Q8TB92 370 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 C16orf78Q8WTQ4 265 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 MYEOVQ96EZ4 313 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 CD180Q99467 661 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 SGIP1Q9BQI5 828 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 NDC1Q9BTX1 674 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 RBCK1Q9BYM8 510 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 BTBD1Q9H0C5 482 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 TRIM36Q9NQ86 728 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 DPP7Q9UHL4 492 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 DRGXA6NNA5 263 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 GABARAPO95166 117 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 CYP17A1P05093 508 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 PCSK2P16519 638 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 ACTR1BP42025 376 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 CASP3P42574 277 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 ACTR1AP61163 376 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 CBLL1Q75N03 491 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 KRT77Q7Z794 578 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 ZNF740Q8NDX6 193 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 RFT1Q96AA3 541 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 SLC25A37Q9NYZ2 338 aa17.06■□□□□ 0.32
ATPAF1-214ENST00000576409 ARHGAP33O14559 1287 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 JRKO75564 520 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 DNASE1P24855 282 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 CMPK1P30085 196 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 DSG2Q14126 1118 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 GALNTL5Q7Z4T8 443 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 RNF31Q96EP0 1072 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 NTMT1Q9BV86 223 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 AKAP7Q9P0M2 348 aaPredicted RBP17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 YARS2Q9Y2Z4 477 aaKnown RBP17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 TNRC6CQ9HCJ0 1690 aaKnown RBP17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 WASH4PA8MWX3 477 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 ITGA3P26006 1051 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 DDX6P26196 483 aaKnown RBP eCLIP17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 TGFBR2P37173 567 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 GRSF1Q12849 480 aaKnown RBP eCLIP17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 FCRLBQ6BAA4 426 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 TMEM107Q6UX40 140 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 ENTHD1Q8IYW4 607 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 ALDH16A1Q8IZ83 802 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 OR8K5Q8NH50 307 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 ASB15Q8WXK1 588 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 CACNG6Q9BXT2 260 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 LINC00597Q9H2U6 94 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 GNG8Q9UK08 70 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 L7N2F9 121 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 ACVR2AP27037 513 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 GRPRP30550 384 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 NTRK2Q16620 822 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 HYAL4Q2M3T9 481 aa17.05■□□□□ 0.32
ATPAF1-214ENST00000576409 SERPINA11Q86U17 422 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms