RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 CDK10Q15131 360 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 PRAMEF14Q5SWL7 426 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 PRAMEF13Q5VWM6 474 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 ZNF366Q8N895 744 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 VN1R2Q8NFZ6 395 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 CREB3L4Q8TEY5 395 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 MRGPRX3Q96LB0 322 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 SEC14L3Q9UDX4 400 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 PLAGL1Q9UM63 463 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 SNX7Q9UNH6 387 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 NINQ8N4C6 2090 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 A0A1W2PQL4 384 aaPredicted RBP16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 LILRB5O75023 590 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 RAB36O95755 333 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 MSL3P1P0C860 447 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 HOXD10P28358 340 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 ETV5P41161 510 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 CCR2P41597 374 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 ETV1P50549 477 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 PIN1Q13526 163 aaPredicted RBP16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 ATAT1Q5SQI0 421 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 NANOGNBQ7Z5D8 188 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 IL17RCQ8NAC3 791 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 DIRAS2Q96HU8 199 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 FUZQ9BT04 418 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 LINC00597Q9H2U6 94 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 EPHX3Q9H6B9 360 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 WDR70Q9NW82 654 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 AHSPQ9NZD4 102 aa16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 DIMT1Q9UNQ2 313 aaKnown RBP16.33■□□□□ 0.2
TOM1L1-221ENST00000575882 CCDC182A6NF36 153 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 FABP12A6NFH5 140 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 K7ESM1 405 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 MMP20O60882 483 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 C8AP07357 584 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 CSF3P09919 207 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 NNMTP40261 264 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 CNTN1Q12860 1018 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 SYT14P1Q58G82 188 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 XKRXQ6PP77 449 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 VASH1Q7L8A9 365 aaPredicted RBP16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 FAM26EQ8N5C1 309 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 MSLNLQ96KJ4 702 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 ZNF607Q96SK3 696 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 PLEKHB1Q9UF11 243 aaPredicted RBP16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 ACAD8Q9UKU7 415 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 SPIN1Q9Y657 262 aaPredicted RBP16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 SMIM30A4D0T7 59 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 PI15O43692 258 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 SLC28A2O43868 658 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 TMCC2O75069 709 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 SOD1P00441 154 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 FHP07954 510 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 TRAPPC2P0DI81 140 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 TRAPPC2BP0DI82 140 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 CPEP16870 476 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 SMIM11AP58511 58 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 FLYWCH1Q4VC44 716 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 LY6G5CQ5SRR4 150 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 PDZK1Q5T2W1 519 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 PODNL1Q6PEZ8 512 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 PARS2Q7L3T8 475 aaKnown RBP16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 KRT78Q8N1N4 520 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 CLDN22Q8N7P3 220 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 PXYLP1Q8TE99 480 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 TM4SF18Q96CE8 201 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 LRR1Q96L50 414 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 ZNF717Q9BY31 904 aaPredicted RBP16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 POLDIP3Q9BY77 421 aaKnown RBP16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 C11orf54Q9H0W9 315 aaPredicted RBP16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 NEUROD4Q9HD90 331 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 SIRT3Q9NTG7 399 aaPredicted RBP16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 A4GNTQ9UNA3 340 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 CARD8Q9Y2G2 431 aa16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 YARS2Q9Y2Z4 477 aaKnown RBP16.32■□□□□ 0.2
TOM1L1-221ENST00000575882 M0R3H8 397 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 TBX6O95947 436 aaPredicted RBP16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 LGI1O95970 557 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 SYN1P17600 705 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 WEE1P30291 646 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 COMTD1Q86VU5 262 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 NRSN1Q8IZ57 195 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 EXOSC8Q96B26 276 aaKnown RBP16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 DTD2Q96FN9 168 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 PPP1R16AQ96I34 528 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 F2RL3Q96RI0 385 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 TMEM246Q9BRR3 403 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 SPHK2Q9NRA0 654 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 HCFC1R1Q9NWW0 138 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 PAQR5Q9NXK6 330 aaPredicted RBP16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 DKK3Q9UBP4 350 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 PLXND1Q9Y4D7 1925 aa16.31■□□□□ 0.2
TOM1L1-221ENST00000575882 SCO2O43819 266 aa16.3■□□□□ 0.2
TOM1L1-221ENST00000575882 GUCY1B2O75343 617 aa16.3■□□□□ 0.2
TOM1L1-221ENST00000575882 TSPAN19P0C672 248 aa16.3■□□□□ 0.2
TOM1L1-221ENST00000575882 SDC2P34741 201 aa16.3■□□□□ 0.2
TOM1L1-221ENST00000575882 DMPKQ09013 629 aa16.3■□□□□ 0.2
TOM1L1-221ENST00000575882 MADCAM1Q13477 382 aa16.3■□□□□ 0.2
TOM1L1-221ENST00000575882 NFE2L1Q14494 772 aa16.3■□□□□ 0.2
TOM1L1-221ENST00000575882 GINS1Q14691 196 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms