RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 MLKLQ8NB16 471 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 ASB5Q8WWX0 329 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 DNAAF4Q8WXU2 420 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 GTF2H4Q92759 462 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 HIST1H2ACQ93077 130 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 TMEM45BQ96B21 275 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 OTULINQ96BN8 352 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 R3HDM4Q96D70 268 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 TMA16Q96EY4 203 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 ZFYVE19Q96K21 471 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF582Q96NG8 517 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 PRR25Q96S07 402 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 TTYH2Q9BSA4 534 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 MED10Q9BTT4 135 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 LRRC1Q9BTT6 524 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 TSSK1BQ9BXA7 367 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 ACTRT3Q9BYD9 372 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 LRRC2Q9BYS8 371 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 SLA2Q9H6Q3 261 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 RAB18Q9NP72 206 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 ADAP2Q9NPF8 381 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 GSN-AS1Q9NRJ2 163 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 LYARQ9NX58 379 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 C1RLQ9NZP8 487 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 EPHA6Q9UF33 1036 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 NDRG3Q9UGV2 375 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 PSORS1C1Q9UIG5 152 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 FBXO4Q9UKT5 387 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 FZD4Q9ULV1 537 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 INSL6Q9Y581 213 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 MROH7-TTC4A0A0A0MT08 1334 aa4.67□□□□□ -1.66
TOPBP1-210ENST00000572787 ROCK1Q13464 1354 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ATP10DQ9P241 1426 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 A0A096LPK6 155 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 A0A0A0MQY5 61 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 KRTAP4-8A0A0G2JLE6 195 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 UBE2QL1A1L167 161 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 TMEM200CA6NKL6 621 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ARHGEF33A8MVX0 844 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 F8VVB4 439 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 F8VWA3 439 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 H7C1Q1 480 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 PRYO14603 147 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ARPC1BO15143 372 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 OIP5O43482 229 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 LDB3O75112 727 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 LRCH4O75427 683 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 STC2O76061 302 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 IL6P05231 212 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 STSP08842 583 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 GOLGA8HP0CJ92 632 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 NCK1P16333 377 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 EIF2S2P20042 333 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 MMP11P24347 488 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 STOMP27105 288 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 LAP3P28838 519 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 HMOX2P30519 316 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 APOBEC3AP31941 199 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 PTGER4P35408 488 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 AHRP35869 848 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 HMGCLP35914 325 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 FEN1P39748 380 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 CRYBB2P43320 205 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 GPR12P47775 334 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF84P51523 738 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 GEMP55040 296 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 CLDN18P56856 261 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 CRYZQ08257 329 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 GAGE2BQ13066 116 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 EXOSC2Q13868 293 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 GRB14Q14449 540 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ITIH4Q14624 930 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ZSWIM7Q19AV6 140 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 SLC5A12Q1EHB4 618 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ODF4Q2M2E3 257 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 PLEKHN1Q494U1 663 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 CD300EQ496F6 205 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 GAGE2EQ4V326 116 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 PRAMEF19Q5SWL8 479 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 NCAPH2Q6IBW4 605 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 OR4F3Q6IEY1 312 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 GAGE2AQ6NT46 116 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 TRMT10BQ6PF06 316 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 DPY19L3Q6ZPD9 716 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 TMC8Q8IU68 726 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 CROCCP3Q8IVE0 287 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 DCUN1D3Q8IWE4 304 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF444Q8N0Y2 327 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 GPC2Q8N158 579 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 LIX1Q8N485 282 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 DDHD1Q8NEL9 900 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ZNF680Q8NEM1 530 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ABHD11Q8NFV4 315 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 OR4D6Q8NGJ1 314 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 OR14K1Q8NGZ2 314 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 XAGE5Q8WWM1 108 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 WFDC12Q8WWY7 111 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ESR2Q92731 530 aa4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 ATOH1Q92858 354 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-210ENST00000572787 RPL3LQ92901 407 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms