RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 OR52I1Q8NGK6 324 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 RNF31Q96EP0 1072 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 LRR1Q96L50 414 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 TM9SF2Q99805 663 aa16.57■□□□□ 0.24
SCARF1-205ENST00000571272 TRAV19A0A0A6YYK7 116 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 FAAHO00519 579 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 TEX28O15482 410 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 NME6O75414 186 aaPredicted RBP16.56■□□□□ 0.24
SCARF1-205ENST00000571272 CTSLP07711 333 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 WEE1P30291 646 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 GPC1P35052 558 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 ASAH1Q13510 395 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 LHX8Q68G74 356 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 PAMR1Q6UXH9 720 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 UNC5DQ6UXZ4 953 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 GLCCI1Q86VQ1 547 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 RACGAP1Q9H0H5 632 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 SEC14L3Q9UDX4 400 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 MALT1Q9UDY8 824 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 NDOR1Q9UHB4 597 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 M0R3H8 397 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 PQBP1O60828 265 aaKnown RBP16.56■□□□□ 0.24
SCARF1-205ENST00000571272 B4GALT2O60909 372 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 KIR2DL3P43628 341 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 RPS5P46782 204 aaKnown RBP16.56■□□□□ 0.24
SCARF1-205ENST00000571272 TMEM215Q68D42 235 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 ACSM5Q6NUN0 579 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 XKRXQ6PP77 449 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 C6orf120Q7Z4R8 191 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 ABI3BPQ7Z7G0 1075 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 OTUB1Q96FW1 271 aaPredicted RBP16.56■□□□□ 0.24
SCARF1-205ENST00000571272 RNF170Q96K19 258 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 RFXAPO00287 272 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 TP53P04637 393 aaPredicted RBP16.56■□□□□ 0.24
SCARF1-205ENST00000571272 ELFN1P0C7U0 828 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 RPS25P62851 125 aaKnown RBP16.56■□□□□ 0.24
SCARF1-205ENST00000571272 TLE2Q04725 743 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 GINS1Q14691 196 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 SYT14P1Q58G82 188 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 SAXO2Q658L1 398 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 COMTD1Q86VU5 262 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 ADGRF3Q8IZF5 1079 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 VWA5B2Q8N398 1253 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 ZFP41Q8N8Y5 198 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 ATP6V1C2Q8NEY4 427 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 OR9A1PQ8NGU1 263 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 GATAD2BQ8WXI9 593 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 MTERF3Q96E29 417 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 NEURL3Q96EH8 262 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 FRMD6Q96NE9 622 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 SGPP1Q9BX95 441 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 OR2AG1Q9H205 316 aa16.56■□□□□ 0.24
SCARF1-205ENST00000571272 DNMT3AQ9Y6K1 912 aaPredicted RBP16.56■□□□□ 0.24
SCARF1-205ENST00000571272 OBSL1O75147 1896 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 KIAA1671Q9BY89 1806 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 PITPNM1O00562 1244 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 PLA2G10O15496 165 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 IL1AP01583 271 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 SLC35F1Q5T1Q4 408 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 PODNL1Q6PEZ8 512 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 SHFQ7M4L6 423 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 TECPR1Q7Z6L1 1165 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 TM9SF4Q92544 642 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 EXOSC8Q96B26 276 aaKnown RBP16.55■□□□□ 0.24
SCARF1-205ENST00000571272 WDR34Q96EX3 536 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 COMMD3Q9UBI1 195 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 MAU2Q9Y6X3 613 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 SLC28A2O43868 658 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 YES1P07947 543 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 PRKCAP17252 672 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 APEX1P27695 318 aaKnown RBP16.55■□□□□ 0.24
SCARF1-205ENST00000571272 SYPL1Q16563 259 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 CRTC2Q53ET0 693 aaPredicted RBP16.55■□□□□ 0.24
SCARF1-205ENST00000571272 DDI2Q5TDH0 399 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 ADIPOR2Q86V24 386 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 LAPTM4BQ86VI4 370 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 SLC30A8Q8IWU4 369 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 SIMC1Q8NDZ2 872 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 ENKURQ8TC29 256 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 MSLNLQ96KJ4 702 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 FAM83CQ9BQN1 747 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 LINC00597Q9H2U6 94 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 RNF121Q9H920 327 aa16.55■□□□□ 0.24
SCARF1-205ENST00000571272 K7ESM1 405 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 HMGN4O00479 90 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 PLPP1O14494 284 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 RAB36O95755 333 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 KCNJ5P48544 419 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 MAPK12P53778 367 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 OCLNQ16625 522 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.54■□□□□ 0.24
SCARF1-205ENST00000571272 FAM92BQ6ZTR7 304 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 SLC9B2Q86UD5 537 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 PDZD3Q86UT5 571 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 RDH10Q8IZV5 341 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 ZNF354BQ96LW1 612 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 KCTD7Q96MP8 289 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 NECTIN4Q96NY8 510 aa16.54■□□□□ 0.24
SCARF1-205ENST00000571272 TEFMQ96QE5 360 aaKnown RBP16.54■□□□□ 0.24
SCARF1-205ENST00000571272 F2RL3Q96RI0 385 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms